Gene detail

Detail information of GWHGAAZE023051

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CAN70074.1	0	hypothetical protein VITISV_028565 [Vitis vinifera]
COG	YP_003950164.1	5E-33	cytochrome p450
Swissprot	tr\|Q9LMX7\|C78A5_ARATH	2E-180	Cytochrome P450 78A5
trEMBL	tr\|A5BES1\|A5BES1_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN70074.1}
TAIR10	AT1G13710.1	9E-141	cytochrome P450, family 78, subfamily A, polypeptide 5

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	82612220	82614820	+
GWHAAZE00000006	mRNA	82612220	82614820	+
GWHAAZE00000006	exon	82612220	82613185	+
GWHAAZE00000006	exon	82614209	82614820	+
GWHAAZE00000006	CDS	82612220	82613185	+
GWHAAZE00000006	CDS	82614209	82614820	+

Transcript Sequence
>GWHTAAZE023081 ATGAAGTCTTTAATTATGTTCCCAATCATAACCCTCTCTCTCTTAATCCTATGTTTCACGGCCACTTACGAGACCACATTCCTTCTCTCTGTTATCCTCCTCTTCTCTCTCCTCCCTTTCTTCTTAAACCTATGCATAGTCCCGGGAGGCTTTGCATGGAGAAACTATCAATCCCTAAAAAACCCTAAACAACTTTCCGGCCCTATGGGTCTGCCTTTCTTGGGGACCTTACCTCAAATGGGCTCTCATGCTCATAAAAAACTAGCTACTATGGCTTCTTCATTCAGCTCCATTCGGCTCATGGCGTTTAGCCTTGGCTCAACTCGTGCAGTAATCAGCAGCCACCCTGACACCGCTAAGGAAATCCTATGTGGGGCCTCATTTTCGGACCGTCCCATAAAGGAATCGGCGTGTTTATTGATGTTCGAACGCGCCATTGGGTTTGCTCCCTCTGGGGACTACTGGCGGCACCTCAGGAGGATTGCGGCAAATTACATGTTTGCCCCTAGGAGAATCTCGGGCCTTGAAGGGCTCCGACAGCGTGTGGCTAATGAGGTGATAGAGGGAGTGGTGAAGGAGATGAGGGATAGAGGCGTTGTGGAAGTGAGAAGATTTTTGCAAAAGGGTTCTTTGAGTAATATGTTAGAGAGTGTGTTTGGGTGTGGTTTAGGGTTTGAAGAGGAGGAGCTGGGGTTTCTAGTGAAAGAAGGGTATGAGTTGATAGGGCAATTCAATTGGGGCGATTATTTTGGATTAGGGTTTTTGGACTTTTATGGAGTGAAGAGAAGATGTAATAAACTATCATGTAAGGTGAAGGGTGTTGTCGGTGGAATCATAGAACAGAGGAGGAGAAAAAAAGATGGTAGTGGAGATTTGATGTGCGGGAGTAATGACTTTCTTAGTGTTTTGCTTTCTTTGCCTAAAGAGGACCAACTTTGTGATGCAGATATGGTGGCTTTCCTTTGGGAGATGATATTTAGAGGAACAGATACAGTTGCTATCCTTCTTGAATGGATCATGGCTAGGATGGTTTTGCACCAAGATATTCAATCAAAAGCCCAGCAAGAAATTGACACGTGCGTTGGCAACCATAGGCACGTGCAAGATTCCGACATACCCAATCTCCCATTCCTCCAATCCATTGTTAAAGAAGTTCTCAGGCTCCACCCACCTGGCCCACTACTCTCGTGGGCCCGACTAGCAGTCCACGATGTCCACGTGGACAAATTCTTCATCCCAGCTGGCACAACGGCTATGGTTAACATGTGGGCCATAACACACAACCCGACCATTTGGAATGACCCATGGGATTTCAAGCCTGAAAGGTTCATGGACGAGGACTTTTCTATCATGGGCTCAGACCTTAGGCTCGCACCGTTTGGGGCGGGCCGCAGGGTGTGCCCAGGCAAGGCTATGGGTCTAGCTACAGTTCAATTGTGGCTCGCTCGACTGCTACAAAAATTCAAATGGCTTCCAGCTAAATCGGTCGATCTCTCGGAATGTTTGAAGCTTTCTCTTGAAATGAAGAAACCATTAGCTTCTTGTGCAATTATCCGTGGTCGAGAGCTTGATCTGTAG

Network for GWHGAAZE023051

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	67	501	9.50E-78

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.446
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.180
	SRR3591708	Shoot apex	0.150
	SRR3591709	Stem	5.589
	SRR3591710	White floral bud	0.475
	SRR3591711	White flower	0.953
	SRR3591712	Green floral bud	2.147
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.021
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.238
	SRR8316900	Third green stage	0.603
	SRR8316901	Third green stage	0.495
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	2.411
	SRR8316903	Complete white stage	0.159
	SRR8316902	Silver flowering stage	0.090
	SRR8316904	Silver flowering stage	0.109
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.272
	SRR8316907	Gold flowering stage	0.082
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	1.053
	SRR6706287	Light intensity 50%	0.901
	SRR6706288	Light intensity 20%	1.082
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.273
	CNS0095593	Slightly white alabastrum(diploid) 2	0.249
	CNS0095594	Slightly white alabastrum(diploid) 3	0.118
	CNS0095595	Whole white alabastrum(diploid) 2	1.260
	CNS0095596	Whole white alabastrum(diploid) 3	0.825
	CNS0095597	Whole white alabastrum(diploid) 4	0.835
	CNS0095598	Silvery flower (diploied) 1	0.036
	CNS0095599	Silvery flower (diploied) 2	0.544
	CNS0095600	Silvery flower (diploied) 3	0.327
	CNS0095601	Golden flower (diploid) 1	0.208
	CNS0095602	Golden flower (diploid) 2	0.176
	CNS0095603	Golden flower (diploid) 3	0.178
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.046
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.288
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.343
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.356
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.156
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.186
	CNS0095610	Silvery flower (diploied) 1	0.000
	CNS0095611	Silvery flower (diploied) 2	0.041
	CNS0095612	Silvery flower (diploied) 3	0.156
	CNS0095613	Golden flower (tetraploid) 1	0.092
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.569
	CRR073298	Stem 2	0.305
	CRR073299	Stem 3	0.408
	CRR073300	Leaf 1	1.339
	CRR073301	Leaf 2	1.111
	CRR073302	Leaf 3	0.943
	CRR073303	Juvenile bud 1	3.488
	CRR073304	Juvenile bud 2	1.176
	CRR073305	Juvenile bud 3	2.124
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.048
	CRR073309	Second white 1	0.005
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.082
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.048
	CRR073316	Gold flowering 2	0.122
	CRR073317	Gold flowering 3	0.155
	CRR073318	Tawny withering 1	3.388
	CRR073319	Tawny withering 2	1.712
	CRR073320	Tawny withering 3	4.641