Gene detail

Detail information of GWHGAAZE023221

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007202371.1	2.49988E-33	hypothetical protein PRUPE_ppa009270mg [Prunus persica]
Swissprot	tr\|Q851V1\|Y3160_ORYSJ	5E-25	Putative B3 domain-containing protein Os03g0621600
trEMBL	tr\|M5W9U8\|M5W9U8_PRUPE	9E-34	Uncharacterized protein {ECO:0000313\|EMBL:EMJ03570.1}
TAIR10	AT3G06220.1	3E-14	AP2/B3-like transcriptional factor family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	1902506	1904949	-
GWHAAZE00000007	mRNA	1902506	1904949	-
GWHAAZE00000007	exon	1904937	1904949	-
GWHAAZE00000007	exon	1904465	1904839	-
GWHAAZE00000007	exon	1903297	1903466	-
GWHAAZE00000007	exon	1902506	1902745	-
GWHAAZE00000007	CDS	1904937	1904949	-
GWHAAZE00000007	CDS	1904465	1904839	-
GWHAAZE00000007	CDS	1903297	1903466	-
GWHAAZE00000007	CDS	1902506	1902745	-

Transcript Sequence
>GWHTAAZE023251 ATGTCTCTTAAAAACTTCATCAAGCATTTCAATGGAAGAACACCCAAAGAGGTCATCCTTAAAAATCTCGGTGGGAAAATTTGGCATGTAGTCGTGGAAAAAGATAAAGGTGGCCTGTTTCTTAAGAAGGGCTGGCCGGACTTTGTGAAAGATAGTTCTCTAGAGCTGGGTGAGTTCTTGGTTTTTAGATACAATGGAATTTCGGCCTTCAGTGTTAGAATATTTGGTAGGGATGGATGCAAGGAGGAAGATGATTTACCAAATGACAATACCGCCCCCACACGTGTAAAGGTTGAAGCAGCGAGTGAAACAGAGAGTGAATCTGAGCGGACTTGTCGAAAGCGAACCAATTTGGGGAAAAGCCAAACTACGCCTAAAAGATCAAGGGGTCTCGAGGAGAGCTCAATTAGGAGGATCAAAACAAGGTCTGCATTTCCAGAAGTTGCTGCGGGGATCAAAGAAGAAGCTGATCAAGAAGTTGTCAAGTTGATGTCCAAGTCCAAATATCCTTCATTCAAACTTGTAATGGGGCCAAATTTCTTGCAAAAGGGATTCTTGGATATTCCAAAACCATTTGCAAAGATGCATATAAAAGAAGGTACAAGTATTGTGAAGCTTCAGATTTCAAACAAGTCATGGCCAGTGAAGACGATCCCTCTTAGAAAAAATAGGTTATGTGGAGGTTGGCAGTCGTTTGCATGTGAAAACTCCCTTGAACTCGGAGATGTTTCTCTCTTTGAGCTCATTGATAGGGATGATCTTGTGTTCAAAGTTACCATTTTCAAACACACCAACTAA

Network for GWHGAAZE023221

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02362.22	B3	4	76	4.60E-14
PF02362.22	B3	172	263	1.70E-12

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	B3

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.091
	SRR3591706	second leaf	0.167
	SRR3591707	mature leaf	0.020
	SRR3591708	Shoot apex	0.539
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.289
	SRR3591711	White flower	0.437
	SRR3591712	Green floral bud	0.538
	SRR3591713	Yellow flower	0.317
SRP173429	SRR8316895	Juvenile bud stage	1.373
	SRR8316896	Juvenile bud stage	1.689
	SRR8316897	Juvenile bud stage	0.616
	SRR8316894	Third green stage	0.126
	SRR8316900	Third green stage	0.273
	SRR8316901	Third green stage	0.480
	SRR8316898	Complete white stage	0.108
	SRR8316899	Complete white stage	0.107
	SRR8316903	Complete white stage	0.076
	SRR8316902	Silver flowering stage	0.045
	SRR8316904	Silver flowering stage	0.043
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.202
	SRR8316907	Gold flowering stage	0.067
	SRR8316908	Gold flowering stage	0.126
SRP132670	SRR6706286	Control	0.059
	SRR6706287	Light intensity 50%	0.249
	SRR6706288	Light intensity 20%	0.133
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.012
	CNS0095593	Slightly white alabastrum(diploid) 2	0.490
	CNS0095594	Slightly white alabastrum(diploid) 3	1.256
	CNS0095595	Whole white alabastrum(diploid) 2	0.322
	CNS0095596	Whole white alabastrum(diploid) 3	0.554
	CNS0095597	Whole white alabastrum(diploid) 4	0.910
	CNS0095598	Silvery flower (diploied) 1	0.613
	CNS0095599	Silvery flower (diploied) 2	0.833
	CNS0095600	Silvery flower (diploied) 3	0.099
	CNS0095601	Golden flower (diploid) 1	0.327
	CNS0095602	Golden flower (diploid) 2	0.491
	CNS0095603	Golden flower (diploid) 3	0.334
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.408
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.104
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.481
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.628
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.778
	CNS0095610	Silvery flower (diploied) 1	0.068
	CNS0095611	Silvery flower (diploied) 2	0.150
	CNS0095612	Silvery flower (diploied) 3	0.277
	CNS0095613	Golden flower (tetraploid) 1	0.606
	CNS0095614	Golden flower (tetraploid) 2	0.264
	CNS0095615	Golden flower (tetraploid) 3	0.326
CRA001975	CRR073297	Stem 1	1.068
	CRR073298	Stem 2	0.637
	CRR073299	Stem 3	0.344
	CRR073300	Leaf 1	0.067
	CRR073301	Leaf 2	0.363
	CRR073302	Leaf 3	0.225
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.047
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.043
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.228
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	1.086
	CRR073316	Gold flowering 2	3.243
	CRR073317	Gold flowering 3	0.447
	CRR073318	Tawny withering 1	0.013
	CRR073319	Tawny withering 2	0.316
	CRR073320	Tawny withering 3	0.452