Detail information of GWHGAAZE023598


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006432626.13.1096E-105hypothetical protein CICLE_v10001909mg [Citrus clementina]
Swissprottr|B5KRH5|PILR1_LINCY5E-105Bifunctional pinoresinol-lariciresinol reductase
trEMBLtr|A0A067F5R8|A0A067F5R8_CITSI1E-105Uncharacterized protein {ECO:0000313|EMBL:KDO58832.1}
TAIR10AT1G32100.12E-54pinoresinol reductase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene1627464316286696-
GWHAAZE00000007mRNA1627464316286696-
GWHAAZE00000007exon1628651116286696-
GWHAAZE00000007exon1628604016286282-
GWHAAZE00000007exon1627811916278215-
GWHAAZE00000007exon1627748516277700-
GWHAAZE00000007exon1627464316274806-
GWHAAZE00000007CDS1628651116286696-
GWHAAZE00000007CDS1628604016286282-
GWHAAZE00000007CDS1627811916278215-
GWHAAZE00000007CDS1627748516277700-
GWHAAZE00000007CDS1627464316274806-
Transcript Sequence

Network for GWHGAAZE023598

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05368.14NmrA41372.90E-30
PF05368.14NmrA1802499.90E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K21568PLR Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of various secondary metabolites - part 2map00998

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.417
SRR3591706second leaf3.039
SRR3591707mature leaf0.539
SRR3591708Shoot apex3.016
SRR3591709Stem46.179
SRR3591710White floral bud1.550
SRR3591711White flower4.534
SRR3591712Green floral bud1.742
SRR3591713Yellow flower18.090
SRP173429 SRR8316895Juvenile bud stage 1.707
SRR8316896Juvenile bud stage 2.631
SRR8316897Juvenile bud stage 0.719
SRR8316894Third green stage 0.923
SRR8316900Third green stage 3.515
SRR8316901Third green stage 3.371
SRR8316898Complete white stage 0.423
SRR8316899Complete white stage 0.958
SRR8316903Complete white stage 0.508
SRR8316902Silver flowering stage0.474
SRR8316904Silver flowering stage0.380
SRR8316905Silver flowering stage0.125
SRR8316906Gold flowering stage 2.776
SRR8316907Gold flowering stage 1.601
SRR8316908Gold flowering stage 0.502
SRP132670SRR6706286Control2.485
SRR6706287Light intensity 50%1.750
SRR6706288Light intensity 20%2.089
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.498
CNS0095593Slightly white alabastrum(diploid) 20.605
CNS0095594Slightly white alabastrum(diploid) 32.045
CNS0095595Whole white alabastrum(diploid) 21.760
CNS0095596Whole white alabastrum(diploid) 30.803
CNS0095597Whole white alabastrum(diploid) 40.836
CNS0095598Silvery flower (diploied) 11.174
CNS0095599Silvery flower (diploied) 21.376
CNS0095600Silvery flower (diploied) 30.599
CNS0095601Golden flower (diploid) 10.418
CNS0095602Golden flower (diploid) 21.174
CNS0095603Golden flower (diploid) 31.108
CNS0095604Slightly white alabastrum(tetraploid) 10.526
CNS0095605Slightly white alabastrum(tetraploid) 21.159
CNS0095606Slightly white alabastrum(tetraploid) 38.498
CNS0095607Whole white alabastrum(tetraploid) 11.187
CNS0095608Whole white alabastrum(tetraploid) 20.407
CNS0095609Whole white alabastrum(tetraploid) 35.938
CNS0095610Silvery flower (diploied) 11.215
CNS0095611Silvery flower (diploied) 20.941
CNS0095612Silvery flower (diploied) 32.069
CNS0095613Golden flower (tetraploid) 13.146
CNS0095614Golden flower (tetraploid) 21.456
CNS0095615Golden flower (tetraploid) 36.841
CRA001975CRR073297Stem 13.754
CRR073298Stem 21.600
CRR073299Stem 30.903
CRR073300Leaf 11.211
CRR073301Leaf 21.668
CRR073302Leaf 30.934
CRR073303Juvenile bud 10.262
CRR073304Juvenile bud 20.430
CRR073305Juvenile bud 30.312
CRR073306Third green 10.398
CRR073307Third green 20.178
CRR073308Third green 30.293
CRR073309Second white 10.000
CRR073310Second white 21.000
CRR073311Second white 30.363
CRR073312Silver flowering 11.968
CRR073313Silver flowering 21.601
CRR073314Silver flowering 33.066
CRR073315Gold flowering 10.198
CRR073316Gold flowering 20.051
CRR073317Gold flowering 30.301
CRR073318Tawny withering 115.842
CRR073319Tawny withering 223.206
CRR073320Tawny withering 39.721