Gene detail

Detail information of GWHGAAZE023801

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009593164.1	0	PREDICTED: cytochrome P450 711A1 [Nicotiana tomentosiformis]
COG	YP_003178415.1	2E-32	cytochrome P450
Swissprot	tr\|B9DFU2\|MAX1_ARATH	0	Cytochrome P450 711A1
trEMBL	tr\|A0A068UIJ5\|A0A068UIJ5_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_31 {ECO:0000313\|EMBL:CDP08281.1}
TAIR10	AT2G26170.2	3E-158	cytochrome P450, family 711, subfamily A, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	26527095	26528683	-
GWHAAZE00000007	mRNA	26527095	26528683	-
GWHAAZE00000007	exon	26527095	26527424	-
GWHAAZE00000007	exon	26527604	26527699	-
GWHAAZE00000007	exon	26527937	26528683	-
GWHAAZE00000007	CDS	26527937	26528683	-
GWHAAZE00000007	CDS	26527604	26527699	-
GWHAAZE00000007	CDS	26527095	26527424	-

Transcript Sequence
>GWHTAAZE023831 ATGCGAAACACGATATTATCAGTCTACCAACCATCTCACCTAGCCAAGCTGGTACCGACCATGCAAAATTTCATCGAATCTGCATGTCTAAACTTTGACTCTAAGGAAGAAGAAGACATCATTTTCTCAGATCTCTCTCTCAAACTGGCAACTGACGTGATCGGCCAAGCTGCTTTTGGCGTCAACTTTGGCCTCTCTAACCCAAAATCCGAAATTCCTCAGCATAATGATAATGAAATCCAAGACTTCATCAATCAACACATTTACTCCACAACAACGCTTAAAATGGACTTATCGGGCTCATTTTCGATCATATTAGGCCTCCTTGTCCCAATTCTACAAGAACCTTTTCGCCAAATTCTAAAGAGATTACCCTGGTGTATGGACTATAAAGTTGATAAAACTAACCAAAATTTGACTAGCCGGCTCGATGAGATTGTTACGAAGAAAATGAAAGCAGATGCCCGAGGAGGGTCAAAGGACTTTTTGTCACTTATACTAAATGCAAGAGAATCAGAGAAGGCACCAAAGAATATTTTTACTCAAGATTATATTAGCGCTGTGGCTTATGAGCATCTACTTGCTGGATCAGCTACGACTTCATTTACATTATCAACAATTATTTATTTGGTTGCTGGGCATCCGGAAATTGAGAAGAAGTTGCTAGAAGAGATTGATGGGTTTGGTCCACACGATCAAATTCCAACGGCCCTTGATCTTCAGCAAAAATTTCCCTATCTCGATCAGGTGATTAAAGAAGCGATGAGGTTTTACACTGTTTCCCCATTAGTTGCAAGAGAGACATCAAAACCAGTAGAAATCGGTGGATACATTCTCCCTAAGGGAACATGGGTATGGTTAGCGCTCGGAGTTCTAGCAAAAGATCCCAAGAATTTCCCCGAACCGGACAAGTTCAAGCCAGAGAGATTTGATCCAAATTGTCAGGAAGAAAAGAATAGACATCCATATGCAAACATTCCTTTTGGGATCGGGCCCCGTTCTTGCGTAGGACAGAAATTCTCTTTGCAAGAAATTAGGCTCTCTATGATTCATCTGTATCGGAGTTATGTATTTCGACATTCCCCAAACATGGAAAAGCCTTTGGAACTCGACTACGGCATAGTTCTTAATTTTAAGCATGGTGTCAAGGTTAGAGCTATTAAACGCGGATGA

Network for GWHGAAZE023801

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	12	375	4.70E-67

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	8.190
	SRR3591706	second leaf	0.686
	SRR3591707	mature leaf	2.224
	SRR3591708	Shoot apex	2.781
	SRR3591709	Stem	32.997
	SRR3591710	White floral bud	70.605
	SRR3591711	White flower	132.895
	SRR3591712	Green floral bud	13.010
	SRR3591713	Yellow flower	118.347
SRP173429	SRR8316895	Juvenile bud stage	1.312
	SRR8316896	Juvenile bud stage	0.831
	SRR8316897	Juvenile bud stage	0.046
	SRR8316894	Third green stage	1.417
	SRR8316900	Third green stage	12.799
	SRR8316901	Third green stage	8.276
	SRR8316898	Complete white stage	43.954
	SRR8316899	Complete white stage	32.616
	SRR8316903	Complete white stage	66.634
	SRR8316902	Silver flowering stage	33.732
	SRR8316904	Silver flowering stage	30.703
	SRR8316905	Silver flowering stage	13.869
	SRR8316906	Gold flowering stage	123.086
	SRR8316907	Gold flowering stage	137.219
	SRR8316908	Gold flowering stage	79.793
SRP132670	SRR6706286	Control	7.496
	SRR6706287	Light intensity 50%	7.897
	SRR6706288	Light intensity 20%	6.570
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.952
	CNS0095593	Slightly white alabastrum(diploid) 2	5.791
	CNS0095594	Slightly white alabastrum(diploid) 3	4.458
	CNS0095595	Whole white alabastrum(diploid) 2	6.228
	CNS0095596	Whole white alabastrum(diploid) 3	4.460
	CNS0095597	Whole white alabastrum(diploid) 4	6.760
	CNS0095598	Silvery flower (diploied) 1	21.328
	CNS0095599	Silvery flower (diploied) 2	24.229
	CNS0095600	Silvery flower (diploied) 3	58.689
	CNS0095601	Golden flower (diploid) 1	19.939
	CNS0095602	Golden flower (diploid) 2	98.849
	CNS0095603	Golden flower (diploid) 3	90.669
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.627
	CNS0095605	Slightly white alabastrum(tetraploid) 2	3.304
	CNS0095606	Slightly white alabastrum(tetraploid) 3	4.462
	CNS0095607	Whole white alabastrum(tetraploid) 1	5.253
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.515
	CNS0095609	Whole white alabastrum(tetraploid) 3	4.902
	CNS0095610	Silvery flower (diploied) 1	21.828
	CNS0095611	Silvery flower (diploied) 2	24.221
	CNS0095612	Silvery flower (diploied) 3	41.257
	CNS0095613	Golden flower (tetraploid) 1	17.945
	CNS0095614	Golden flower (tetraploid) 2	36.410
	CNS0095615	Golden flower (tetraploid) 3	13.299
CRA001975	CRR073297	Stem 1	0.601
	CRR073298	Stem 2	1.232
	CRR073299	Stem 3	0.783
	CRR073300	Leaf 1	11.721
	CRR073301	Leaf 2	5.567
	CRR073302	Leaf 3	5.100
	CRR073303	Juvenile bud 1	19.217
	CRR073304	Juvenile bud 2	41.164
	CRR073305	Juvenile bud 3	21.926
	CRR073306	Third green 1	20.377
	CRR073307	Third green 2	14.621
	CRR073308	Third green 3	17.172
	CRR073309	Second white 1	96.996
	CRR073310	Second white 2	64.037
	CRR073311	Second white 3	78.597
	CRR073312	Silver flowering 1	53.023
	CRR073313	Silver flowering 2	41.540
	CRR073314	Silver flowering 3	50.679
	CRR073315	Gold flowering 1	1.726
	CRR073316	Gold flowering 2	0.635
	CRR073317	Gold flowering 3	1.891
	CRR073318	Tawny withering 1	5.667
	CRR073319	Tawny withering 2	15.780
	CRR073320	Tawny withering 3	10.586