Detail information of GWHGAAZE024197


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002269025.30PREDICTED: exocyst complex component SEC5A [Vitis vinifera]
Swissprottr|Q8S3U9|SEC5A_ARATH0Exocyst complex component SEC5A
trEMBLtr|A0A067L6X1|A0A067L6X1_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP42998.1}
TAIR10AT1G76850.10exocyst complex component sec5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene3722104837239141+
GWHAAZE00000007mRNA3722104837239141+
GWHAAZE00000007exon3722104837221266+
GWHAAZE00000007exon3722333237223480+
GWHAAZE00000007exon3722487337224961+
GWHAAZE00000007exon3722592237226116+
GWHAAZE00000007exon3722659737226724+
GWHAAZE00000007exon3722680937226967+
GWHAAZE00000007exon3722722437227328+
GWHAAZE00000007exon3722763037227704+
GWHAAZE00000007exon3722804737228184+
GWHAAZE00000007exon3722829937228484+
GWHAAZE00000007exon3722903737229180+
GWHAAZE00000007exon3722967337229799+
GWHAAZE00000007exon3722996437230090+
GWHAAZE00000007exon3723082537230940+
GWHAAZE00000007exon3723103937231273+
GWHAAZE00000007exon3723205837232151+
GWHAAZE00000007exon3723382237233899+
GWHAAZE00000007exon3723398637234042+
GWHAAZE00000007exon3723469337234842+
GWHAAZE00000007exon3723561737235832+
GWHAAZE00000007exon3723891437239141+
GWHAAZE00000007CDS3722104837221266+
GWHAAZE00000007CDS3722333237223480+
GWHAAZE00000007CDS3722487337224961+
GWHAAZE00000007CDS3722592237226116+
GWHAAZE00000007CDS3722659737226724+
GWHAAZE00000007CDS3722680937226967+
GWHAAZE00000007CDS3722722437227328+
GWHAAZE00000007CDS3722763037227704+
GWHAAZE00000007CDS3722804737228184+
GWHAAZE00000007CDS3722829937228484+
GWHAAZE00000007CDS3722903737229180+
GWHAAZE00000007CDS3722967337229799+
GWHAAZE00000007CDS3722996437230090+
GWHAAZE00000007CDS3723082537230940+
GWHAAZE00000007CDS3723103937231273+
GWHAAZE00000007CDS3723205837232151+
GWHAAZE00000007CDS3723382237233899+
GWHAAZE00000007CDS3723398637234042+
GWHAAZE00000007CDS3723469337234842+
GWHAAZE00000007CDS3723561737235832+
GWHAAZE00000007CDS3723891437239141+
Transcript Sequence

Network for GWHGAAZE024197

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15469.7Sec51963733.90E-42
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K17637EXOC2, SEC5 Ras signaling pathway map04014

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf70.789
SRR3591706second leaf34.049
SRR3591707mature leaf32.591
SRR3591708Shoot apex46.493
SRR3591709Stem54.335
SRR3591710White floral bud38.060
SRR3591711White flower41.825
SRR3591712Green floral bud50.285
SRR3591713Yellow flower39.933
SRP173429 SRR8316895Juvenile bud stage 29.417
SRR8316896Juvenile bud stage 44.681
SRR8316897Juvenile bud stage 21.207
SRR8316894Third green stage 19.344
SRR8316900Third green stage 47.845
SRR8316901Third green stage 46.136
SRR8316898Complete white stage 16.256
SRR8316899Complete white stage 54.440
SRR8316903Complete white stage 29.884
SRR8316902Silver flowering stage16.251
SRR8316904Silver flowering stage29.516
SRR8316905Silver flowering stage13.241
SRR8316906Gold flowering stage 41.856
SRR8316907Gold flowering stage 40.133
SRR8316908Gold flowering stage 46.582
SRP132670SRR6706286Control23.637
SRR6706287Light intensity 50%23.428
SRR6706288Light intensity 20%27.088
CNP0000432CNS0095592Slightly white alabastrum(diploid) 127.680
CNS0095593Slightly white alabastrum(diploid) 229.604
CNS0095594Slightly white alabastrum(diploid) 326.791
CNS0095595Whole white alabastrum(diploid) 226.924
CNS0095596Whole white alabastrum(diploid) 326.428
CNS0095597Whole white alabastrum(diploid) 427.410
CNS0095598Silvery flower (diploied) 130.204
CNS0095599Silvery flower (diploied) 228.593
CNS0095600Silvery flower (diploied) 342.096
CNS0095601Golden flower (diploid) 125.435
CNS0095602Golden flower (diploid) 244.135
CNS0095603Golden flower (diploid) 342.565
CNS0095604Slightly white alabastrum(tetraploid) 140.434
CNS0095605Slightly white alabastrum(tetraploid) 230.094
CNS0095606Slightly white alabastrum(tetraploid) 362.704
CNS0095607Whole white alabastrum(tetraploid) 126.866
CNS0095608Whole white alabastrum(tetraploid) 227.153
CNS0095609Whole white alabastrum(tetraploid) 347.879
CNS0095610Silvery flower (diploied) 145.669
CNS0095611Silvery flower (diploied) 240.179
CNS0095612Silvery flower (diploied) 344.094
CNS0095613Golden flower (tetraploid) 123.723
CNS0095614Golden flower (tetraploid) 238.636
CNS0095615Golden flower (tetraploid) 337.448
CRA001975CRR073297Stem 138.125
CRR073298Stem 236.622
CRR073299Stem 331.350
CRR073300Leaf 139.486
CRR073301Leaf 234.692
CRR073302Leaf 330.398
CRR073303Juvenile bud 136.231
CRR073304Juvenile bud 222.371
CRR073305Juvenile bud 338.839
CRR073306Third green 120.582
CRR073307Third green 218.194
CRR073308Third green 321.061
CRR073309Second white 115.669
CRR073310Second white 223.214
CRR073311Second white 321.752
CRR073312Silver flowering 118.056
CRR073313Silver flowering 221.888
CRR073314Silver flowering 321.584
CRR073315Gold flowering 115.835
CRR073316Gold flowering 230.372
CRR073317Gold flowering 313.225
CRR073318Tawny withering 145.694
CRR073319Tawny withering 239.237
CRR073320Tawny withering 344.002