Detail information of GWHGAAZE024232


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004290489.10PREDICTED: peroxidase 12-like [Fragaria vesca subsp. vesca]
Swissprottr|Q96520|PER12_ARATH5E-155Peroxidase 12 (Precursor)
trEMBLtr|M5W6X8|M5W6X8_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ02565.1}
TAIR10AT1G71695.15E-116Peroxidase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene3819112038196095+
GWHAAZE00000007mRNA3819112038196095+
GWHAAZE00000007exon3819112038191374+
GWHAAZE00000007exon3819311538193309+
GWHAAZE00000007exon3819535138196095+
GWHAAZE00000007CDS3819112038191374+
GWHAAZE00000007CDS3819311538193309+
GWHAAZE00000007CDS3819535138195983+
GWHAAZE00000007three_prime_UTR3819598438196095+
Transcript Sequence

Network for GWHGAAZE024232

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0233map00902 Monoterpenoid biosynthesis
GO:0042744 hydrogen peroxide catabolic process GOslim:biological_process
GO:0055114 oxidation-reduction process GOslim:biological_process
GO:0006979 response to oxidative stress GOslim:biological_process
map01110 Biosynthesis of secondary metabolites


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00141.24peroxidase572992.70E-73
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00430E1.11.1.7 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0006979biological_processresponse to oxidative stress
GO:0055114biological_processoxidation-reduction process
GO:0042744biological_processhydrogen peroxide catabolic process
GO:0004601molecular_functionperoxidase activity
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf282.845
SRR3591706second leaf373.400
SRR3591707mature leaf861.910
SRR3591708Shoot apex180.835
SRR3591709Stem899.745
SRR3591710White floral bud219.382
SRR3591711White flower574.382
SRR3591712Green floral bud97.343
SRR3591713Yellow flower460.937
SRP173429 SRR8316895Juvenile bud stage 76.547
SRR8316896Juvenile bud stage 77.109
SRR8316897Juvenile bud stage 33.193
SRR8316894Third green stage 29.751
SRR8316900Third green stage 35.707
SRR8316901Third green stage 38.933
SRR8316898Complete white stage 27.730
SRR8316899Complete white stage 146.032
SRR8316903Complete white stage 52.927
SRR8316902Silver flowering stage24.433
SRR8316904Silver flowering stage35.023
SRR8316905Silver flowering stage14.808
SRR8316906Gold flowering stage 66.976
SRR8316907Gold flowering stage 68.930
SRR8316908Gold flowering stage 110.900
SRP132670SRR6706286Control173.340
SRR6706287Light intensity 50%82.579
SRR6706288Light intensity 20%55.916
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1145.747
CNS0095593Slightly white alabastrum(diploid) 264.981
CNS0095594Slightly white alabastrum(diploid) 395.822
CNS0095595Whole white alabastrum(diploid) 247.650
CNS0095596Whole white alabastrum(diploid) 321.217
CNS0095597Whole white alabastrum(diploid) 451.415
CNS0095598Silvery flower (diploied) 1337.062
CNS0095599Silvery flower (diploied) 2285.396
CNS0095600Silvery flower (diploied) 3133.107
CNS0095601Golden flower (diploid) 1364.914
CNS0095602Golden flower (diploid) 2334.116
CNS0095603Golden flower (diploid) 3328.593
CNS0095604Slightly white alabastrum(tetraploid) 140.199
CNS0095605Slightly white alabastrum(tetraploid) 237.702
CNS0095606Slightly white alabastrum(tetraploid) 384.152
CNS0095607Whole white alabastrum(tetraploid) 140.571
CNS0095608Whole white alabastrum(tetraploid) 224.991
CNS0095609Whole white alabastrum(tetraploid) 315.460
CNS0095610Silvery flower (diploied) 1117.093
CNS0095611Silvery flower (diploied) 2160.197
CNS0095612Silvery flower (diploied) 3112.633
CNS0095613Golden flower (tetraploid) 1106.749
CNS0095614Golden flower (tetraploid) 2168.582
CNS0095615Golden flower (tetraploid) 376.962
CRA001975CRR073297Stem 1147.392
CRR073298Stem 2108.226
CRR073299Stem 3111.472
CRR073300Leaf 136.054
CRR073301Leaf 271.469
CRR073302Leaf 337.900
CRR073303Juvenile bud 122.611
CRR073304Juvenile bud 218.224
CRR073305Juvenile bud 356.329
CRR073306Third green 117.074
CRR073307Third green 217.554
CRR073308Third green 320.463
CRR073309Second white 158.451
CRR073310Second white 235.514
CRR073311Second white 335.433
CRR073312Silver flowering 1123.026
CRR073313Silver flowering 2155.585
CRR073314Silver flowering 3186.727
CRR073315Gold flowering 1166.448
CRR073316Gold flowering 2250.683
CRR073317Gold flowering 3345.421
CRR073318Tawny withering 1262.852
CRR073319Tawny withering 2323.326
CRR073320Tawny withering 3184.075