Detail information of GWHGAAZE024462


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011078388.11.30989E-59PREDICTED: calmodulin-like protein 3 [Sesamum indicum]
COGYP_007118813.19E-21putative signal transduction protein with EFhand domain
Swissprottr|Q9LNE7|CML7_ARATH8E-46Calmodulin-like protein 7
trEMBLtr|F6HHA8|F6HHA8_VITVI2E-55Putative uncharacterized protein {ECO:0000313|EMBL:CCB51604.1}
TAIR10AT1G05990.15E-37EF hand calcium-binding protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene4289043642890912-
GWHAAZE00000007mRNA4289043642890912-
GWHAAZE00000007exon4289043642890912-
GWHAAZE00000007CDS4289043642890912-
Transcript Sequence

Network for GWHGAAZE024462

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0261Protein Kinases RLK-Pelle_CrRLK1L-1 family Protein Kinases RLK-Pelle_CrRLK1L-1
Protein Kinases RLK-Pelle_LRR-Xa family Protein Kinases RLK-Pelle_LRR-Xa
Protein Kinases RLK-Pelle_RLCK-IV family Protein Kinases RLK-Pelle_RLCK-IV
Transcription factor MADS-MIKC family Transcription factor MADS-MIKC
GO:0006783 heme biosynthetic process GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0005524 ATP binding GOslim:molecular_function
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function
GO:0004325 ferrochelatase activity GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding GOslim:molecular_function
GO:0045944 positive regulation of transcription by RNA polymerase II GOslim:biological_process
GO:0042254 ribosome biogenesis GOslim:biological_process


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.7EF-hand_710711.00E-14
PF13499.7EF-hand_7861491.10E-11
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005509molecular_functioncalcium ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf51.984
SRR3591706second leaf24.550
SRR3591707mature leaf26.757
SRR3591708Shoot apex34.366
SRR3591709Stem72.373
SRR3591710White floral bud30.700
SRR3591711White flower23.239
SRR3591712Green floral bud33.332
SRR3591713Yellow flower5.186
SRP173429 SRR8316895Juvenile bud stage 16.904
SRR8316896Juvenile bud stage 16.075
SRR8316897Juvenile bud stage 8.061
SRR8316894Third green stage 7.208
SRR8316900Third green stage 11.414
SRR8316901Third green stage 11.138
SRR8316898Complete white stage 0.415
SRR8316899Complete white stage 38.539
SRR8316903Complete white stage 3.155
SRR8316902Silver flowering stage0.610
SRR8316904Silver flowering stage0.733
SRR8316905Silver flowering stage0.264
SRR8316906Gold flowering stage 1.158
SRR8316907Gold flowering stage 1.266
SRR8316908Gold flowering stage 0.211
SRP132670SRR6706286Control8.502
SRR6706287Light intensity 50%8.768
SRR6706288Light intensity 20%7.589
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.211
CNS0095593Slightly white alabastrum(diploid) 218.328
CNS0095594Slightly white alabastrum(diploid) 318.933
CNS0095595Whole white alabastrum(diploid) 216.225
CNS0095596Whole white alabastrum(diploid) 36.350
CNS0095597Whole white alabastrum(diploid) 416.869
CNS0095598Silvery flower (diploied) 123.492
CNS0095599Silvery flower (diploied) 211.799
CNS0095600Silvery flower (diploied) 37.224
CNS0095601Golden flower (diploid) 116.143
CNS0095602Golden flower (diploid) 213.663
CNS0095603Golden flower (diploid) 310.971
CNS0095604Slightly white alabastrum(tetraploid) 16.354
CNS0095605Slightly white alabastrum(tetraploid) 24.765
CNS0095606Slightly white alabastrum(tetraploid) 311.109
CNS0095607Whole white alabastrum(tetraploid) 15.677
CNS0095608Whole white alabastrum(tetraploid) 21.997
CNS0095609Whole white alabastrum(tetraploid) 35.204
CNS0095610Silvery flower (diploied) 11.694
CNS0095611Silvery flower (diploied) 22.913
CNS0095612Silvery flower (diploied) 33.553
CNS0095613Golden flower (tetraploid) 10.628
CNS0095614Golden flower (tetraploid) 22.199
CNS0095615Golden flower (tetraploid) 30.662
CRA001975CRR073297Stem 123.541
CRR073298Stem 224.464
CRR073299Stem 336.910
CRR073300Leaf 127.847
CRR073301Leaf 236.326
CRR073302Leaf 323.189
CRR073303Juvenile bud 122.448
CRR073304Juvenile bud 215.981
CRR073305Juvenile bud 333.471
CRR073306Third green 13.027
CRR073307Third green 24.086
CRR073308Third green 36.577
CRR073309Second white 11.627
CRR073310Second white 22.019
CRR073311Second white 32.590
CRR073312Silver flowering 11.488
CRR073313Silver flowering 24.127
CRR073314Silver flowering 31.846
CRR073315Gold flowering 165.837
CRR073316Gold flowering 262.300
CRR073317Gold flowering 359.577
CRR073318Tawny withering 175.515
CRR073319Tawny withering 268.454
CRR073320Tawny withering 391.025