Gene detail

Detail information of GWHGAAZE025137

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002264117.1	1.1988E-106	PREDICTED: probable glutathione S-transferase [Vitis vinifera]
COG	YP_007067680.1	1E-19	glutathione S-transferase
Swissprot	tr\|Q9FQA3\|GST23_MAIZE	1E-67	Glutathione transferase GST 23
trEMBL	tr\|F6HJH8\|F6HJH8_VITVI	4E-107	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB52377.1}
TAIR10	AT2G29420.1	2E-45	glutathione S-transferase tau 7

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	55909405	55910915	+
GWHAAZE00000007	mRNA	55909405	55910915	+
GWHAAZE00000007	exon	55909405	55909725	+
GWHAAZE00000007	exon	55910553	55910915	+
GWHAAZE00000007	CDS	55909405	55909725	+
GWHAAZE00000007	CDS	55910553	55910915	+

Transcript Sequence
>GWHTAAZE025171 ATGAGGCCGGCACAAGAAGAAGTGAAGCTCTTTAGGAACTGGTCAAGTGCATATGCTCTAAGGATTGTTTGGGCGCTGAAGATCAAAGGAATTGAATTCCATACCGTATTCGAGGATCTCGAAAACAAGAGCCCATCGCTCCTCCACTACAATCCTGTTCACAAAAAGGTTCCGGTGCTCGTCCACAATGGAAAACCCATCTGTGAATCACTTGTAGTTCTTGAGTACATCGAAGAAACATGGAAACAAAATCCTCTGTTACCTGAAGATCCTCTTGATAAAGCCACTGCACGTTTCTGGGCGAAATTCAATGACGATAAGCTTTTGCCATCAATGGCTGTCGTTTTCACCACGCAAGGGAAGGAGCAAGAGGAAGTTAAAGTCCCAGTCATGGAAAACCTGAAATTTGTAGACGAACAGCTGAAAGGAAGGAAATACTTTGGAGGAGAGAAAATCGGGTTCCTAGATATTGTGTTTGGCTGGTTGGCTAATATGGCTAGTGTCGTAGAAGAGGTAGCTGGTGTACAATTGATAGATGAAGAGAATTTTCCACTCTTAAAGGCATGGATGGAACTGTTTTCCGACACTCCAGTGATCAAAGAAAGCTGGCCAGATCGAGAAAAGCTAATTATCAAGTACCAACTACGTCGTGAGGGGTACCTTGCATCCTCTGTAGCTAAATGA

Network for GWHGAAZE025137

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02798.21	GST_N	7	78	8.00E-19
PF00043.26	GST_C	121	194	7.30E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00799	GST, gst	Metabolic pathways	map01100
		Glutathione metabolism	map00480
		Metabolism of xenobiotics by cytochrome P450	map00980
		Drug metabolism - cytochrome P450	map00982
		Drug metabolism - other enzymes	map00983
		Longevity regulating pathway - worm	map04212

Gene Ontology

GO term	Ontology	Name
GO:0005515	molecular_function	protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	4.090
	SRR3591706	second leaf	4.682
	SRR3591707	mature leaf	15.973
	SRR3591708	Shoot apex	3.854
	SRR3591709	Stem	25.391
	SRR3591710	White floral bud	8.221
	SRR3591711	White flower	241.956
	SRR3591712	Green floral bud	4.512
	SRR3591713	Yellow flower	324.822
SRP173429	SRR8316895	Juvenile bud stage	2.202
	SRR8316896	Juvenile bud stage	2.901
	SRR8316897	Juvenile bud stage	2.246
	SRR8316894	Third green stage	1.152
	SRR8316900	Third green stage	2.829
	SRR8316901	Third green stage	2.755
	SRR8316898	Complete white stage	6.924
	SRR8316899	Complete white stage	7.167
	SRR8316903	Complete white stage	6.015
	SRR8316902	Silver flowering stage	50.650
	SRR8316904	Silver flowering stage	49.694
	SRR8316905	Silver flowering stage	36.014
	SRR8316906	Gold flowering stage	117.802
	SRR8316907	Gold flowering stage	132.424
	SRR8316908	Gold flowering stage	139.285
SRP132670	SRR6706286	Control	2.549
	SRR6706287	Light intensity 50%	1.824
	SRR6706288	Light intensity 20%	1.998
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	8.208
	CNS0095593	Slightly white alabastrum(diploid) 2	12.393
	CNS0095594	Slightly white alabastrum(diploid) 3	19.138
	CNS0095595	Whole white alabastrum(diploid) 2	22.301
	CNS0095596	Whole white alabastrum(diploid) 3	1.950
	CNS0095597	Whole white alabastrum(diploid) 4	21.818
	CNS0095598	Silvery flower (diploied) 1	18.252
	CNS0095599	Silvery flower (diploied) 2	24.544
	CNS0095600	Silvery flower (diploied) 3	29.673
	CNS0095601	Golden flower (diploid) 1	17.414
	CNS0095602	Golden flower (diploid) 2	34.399
	CNS0095603	Golden flower (diploid) 3	34.701
	CNS0095604	Slightly white alabastrum(tetraploid) 1	5.794
	CNS0095605	Slightly white alabastrum(tetraploid) 2	5.234
	CNS0095606	Slightly white alabastrum(tetraploid) 3	7.113
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.761
	CNS0095608	Whole white alabastrum(tetraploid) 2	3.953
	CNS0095609	Whole white alabastrum(tetraploid) 3	3.570
	CNS0095610	Silvery flower (diploied) 1	288.759
	CNS0095611	Silvery flower (diploied) 2	112.341
	CNS0095612	Silvery flower (diploied) 3	68.584
	CNS0095613	Golden flower (tetraploid) 1	148.812
	CNS0095614	Golden flower (tetraploid) 2	180.393
	CNS0095615	Golden flower (tetraploid) 3	45.177
CRA001975	CRR073297	Stem 1	4.342
	CRR073298	Stem 2	2.320
	CRR073299	Stem 3	1.749
	CRR073300	Leaf 1	4.813
	CRR073301	Leaf 2	3.706
	CRR073302	Leaf 3	3.216
	CRR073303	Juvenile bud 1	3.553
	CRR073304	Juvenile bud 2	2.386
	CRR073305	Juvenile bud 3	5.151
	CRR073306	Third green 1	3.014
	CRR073307	Third green 2	8.725
	CRR073308	Third green 3	3.932
	CRR073309	Second white 1	6.442
	CRR073310	Second white 2	14.633
	CRR073311	Second white 3	7.682
	CRR073312	Silver flowering 1	5.044
	CRR073313	Silver flowering 2	4.899
	CRR073314	Silver flowering 3	10.893
	CRR073315	Gold flowering 1	5.067
	CRR073316	Gold flowering 2	10.233
	CRR073317	Gold flowering 3	6.595
	CRR073318	Tawny withering 1	6.572
	CRR073319	Tawny withering 2	9.185
	CRR073320	Tawny withering 3	2.311