Gene detail

Detail information of GWHGAAZE025560

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010656403.1	0	PREDICTED: uncharacterized protein LOC100267909 isoform X1 [Vitis vinifera]
COG	YP_001958461.1	5E-30	hypothetical protein Aasi_1443
Swissprot	tr\|Q9FPR3\|EDR1_ARATH	2E-49	Serine/threonine-protein kinase EDR1
trEMBL	tr\|A0A067K803\|A0A067K803_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP32366.1}
TAIR10	AT5G57610.1	6E-125	Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	63323401	63330681	+
GWHAAZE00000007	mRNA	63323401	63330681	+
GWHAAZE00000007	exon	63323401	63325734	+
GWHAAZE00000007	exon	63325806	63325904	+
GWHAAZE00000007	exon	63326014	63326166	+
GWHAAZE00000007	exon	63326396	63326559	+
GWHAAZE00000007	exon	63327893	63328040	+
GWHAAZE00000007	exon	63328699	63328818	+
GWHAAZE00000007	exon	63329623	63329710	+
GWHAAZE00000007	exon	63330515	63330681	+
GWHAAZE00000007	CDS	63323401	63325734	+
GWHAAZE00000007	CDS	63325806	63325904	+
GWHAAZE00000007	CDS	63326014	63326166	+
GWHAAZE00000007	CDS	63326396	63326559	+
GWHAAZE00000007	CDS	63327893	63328040	+
GWHAAZE00000007	CDS	63328699	63328818	+
GWHAAZE00000007	CDS	63329623	63329710	+
GWHAAZE00000007	CDS	63330515	63330681	+

Transcript Sequence
>GWHTAAZE025594 ATGATAGACCATTCTCTCTCTGACAACAACAGAAAACTAAACCACCACCACCCCCAATCACCAAAAAAGATCAAGCTCCTCTGCAGATTCAACGGCAAATTCCAGCCCCGTCCACACTCCGGCGAGCCCCGTTACACCGGCGGTGACACTCGCATCATCTCCGTCGACCGCAACATCTCTTTTACACGGCTCAAATCGAAGATCTCCGAGTTAGTTTTTATAAATCCTAGCAACAGCGAGGGGAATTCATTCTCTCTCGTATACCACCGCCAGGTTTGCCATTCCGCCGGCGGAGATCTACAGCTCGCTGTGGTTACGTCGGACGATGACGTCAGGTGCATGATTGAAGAGTATGATAAGGTGGAGTTGGAAGGTAAGGTTTCTAGGGTTTGGATTTATGTGTGTAATGTTAATGGACTTGGTTTGAAATTGAATAGTAATAATGTGTCTGTAAACTGTTTTCAAACTGAAGATTTGTGTAATGGATCAAGTGTTATGCGTAAAAAGAGCGGATCTGAGAGTCGAAATTCGACTAAGAAATTGGGGAAGAGTGTGGCTGGCGTGAGGTGTAGTGATGATTCGTTGAGAAAACTTGTGTTAAAACAACAGTTATTGGCTAAGCAACGTGGTTTAGTGCTAACTATTGCGGAAAATGAAATGGAATGTCGTAATGAACATGGAAATTATGATCATCCTGTTTTAGATTTGGCTTCTGAATCTCAAAGCTTTTTGAGCAATGAAACCATAAAGCATCATATCGTCGGTAATTGGTGTAGGAGGAATAGTTTGGAGTACAGATATACCAATTCCAATCTTGTGGGAAGCGAGAATCTTGGGAATTTACCTCTTTCTCATTCACATCCGTTGAGTGTAAATGATGGAAATTTCGAGTCTGATATAAATTCTTGTCTGATTTTGGGTACTGGAGCTGGGACTAGTTCTGGTAGTTCAACTCAGTTGATTTCGGGAGCGCGGTTTTCGAAGCCATTTTACAACCCTAAAATGAATTCAGTGGTTACTAGAAATGGTAAGAAAGCATTGTCGAATAACATGAATAGGGAAAACATTGTGCCCTGTGGTTTAGATTGCAATACTGCTAGGACGGGGCTGGTGCCATTCTCTTCAGGCTGTGAGTTGGGTGGAAGTGTATATCCGTTGAAGTCTACAAATGGTAGTAGTCAGAATCACAGATGGAGCCATCGATTCGGGTTAAGTGAGACAAGAAACCAGAGAACTTGTTTGTATCAAATTCGGAACCATCGGAACAATCTCAATGAAATGGGGAACCATCGGAATGTTAGACTGGAAAGCAGACCTTGGGTGGGGAAATTTTACCCTGGGCTTAAGTCAATCTCGAACATCTCGAAACATTTGTCTAAGCTGTGGTCTGCTTCTCATTACCAAAAAGAGGGGCTGGCAAGAACAACAGAAGGTGGCCCTAATAGCCAAATTGATTCATATAGTGTTCTTTATGGCAAGCCAAATCCCAAGGAATGTCATTTAGCTTATCATGGTGCTTCCACTGCCATGGCTGAGCGGACCCTCTTGTCTCAGGAGCCTCTCGAGAAGCTTTCACCCTGTACAAGGGCTTTGAACACTCAGATTGATCTCTTAGGTGGTCCTAGTTCCGAGCAGAATGAAGTTCTTCCAATTCAAACTCTCTACAATAATCTTGAAATGCCCATGAACAAACAAGATTTTTACGTTCTCAATGAGGCACTGTACCTGATGGACCAACAAGAGGCTCTTGAGAAGCCATCGCCCTGCTCAAGGGCTTTGGATACTCAGATTGATCTATTAACGGGTTCTATTTCCAAGCAGCATGAAGTTTCAAATCAAACCTACAACAGTAATCTTGAAATTCCCATGAATGAGCAAGACTATTATGATATCAACGAGGAACCATACCCGATGGACCAACACGAAGTTGAAATTACCACCGCTTTGGGTTGCAATGGTAAATTCTCGGATGTAGAAGCAGGCTGCAAGTCATTCAGCTATCGCCAGAATGGTCCCTGTACTGTACAAGGGGGCATTGCGTCTTGTGTGGATCTTTCATTGCATAACCTCTCGTTGTCTTCTTCCAAACATGTGGAACCGCCACCCGTTTCTTCTCCTCATAATGCAAATTTCTCTGAAGTCCTGCTGAAGCCTCAATCGAAACCTTATGATCTAATGGATGAAGAACACTTCAGCTCATCCCCTCAAGTTGAAAAATCAAGTGGAGTTGCTTCTCTTTCTACTTCTCAAAATGAAGCCAAAATGGGAAAAGATATAGACAAAAAGATAGAAATTGAGCAGGACCCTCAGTCCGGTTTAAGCTCTAATGAAAAGGAGCACATTAAGAAGATGGACAAGAATTCAAAATTAAATGGTGTGATCCCTCTCGAACTTGCAGCATTTTACACTCATTTAGCTACCAGAGAGCTGCAGACTATAAAAGCTTCTGACCTTGAATATGTTAAAGAACTTGGATCGGGTACTTATGGAACGGTTTTCTATGGAAAATGGAAGGGATCCGATGTTGCCATTAAAAGGATAAAACCCAGCTGTTTCAGTGAAAGTACCATTGGGGAGGATCGATTGGTTGCTGACTTCTGGAAGGAAGCACATATACTAGGTCAGCTTCACCATCCGAATATTGTGGCATTGTATGGTGTAGTTACAGATGGGCCTTTTACCAGTTTGGCAACAGTCACAGAGTACATGGTCAATGGCTCCCTTAAACAAGTTTTGTGGAGGAAAGATAGAACTATTGACCGCCGAAAGAGGATGATTATAGCGATGGATGCAGCTTTCGGTATGCAATATCTACATGAAAAGAGCATTGTCCACTTCGATTTGAAGTCTCATAACTTTCTAGTGAATATGAGGGATCCTCAACGACCAGTGTGCAAGATTGGCGATTTAGGTTTATCAAAAATTAAGCAGAAGACACTTGTCTCTGGTGGGGTACGAGGAACCATACCATGGATGGCCCCGGAGCTTTTGATTAGTAAGAACATGGTAACAGAAAAGGTGGATGTCTATTCATTTGGAATTGTCATGTGGGAACTCTTGACAGGGGAGGAGCCTTATTCGAATTTGCGATCGGAGGAAATAATAGCCGGTATAATCAAAGGCAATCTCAGACCAGAAATCCCACATTGGTGTGACCCGACATGGAGATCAGTGATGGAGAGATGTTGGTCGTCAGATCCAGATGCTAGGCCGACCTTCTCGGAGATTGCGAAGGAGCTACGAGCCATGGCAGCAGCAATGAACATTAAGTAA

Network for GWHGAAZE025560

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00564.25	PB1	44	130	2.90E-06
PF07714.18	PK_Tyr_Ser-Thr	819	1080	4.90E-62

Protein Sequence

>GWHPAAZE025578
MIDHSLSDNNRKLNHHHPQSPKKIKLLCRFNGKFQPRPHSGEPRYTGGDTRIISVDRNISFTRLKSKISELVFINPSNSEGNSFSLVYHRQVCHSAGGDLQLAVVTSDDDVRCMIEEYDKVELEGKVSRVWIYVCNVNGLGLKLNSNNVSVNCFQTEDLCNGSSVMRKKSGSESRNSTKKLGKSVAGVRCSDDSLRKLVLKQQLLAKQRGLVLTIAENEMECRNEHGNYDHPVLDLASESQSFLSNETIKHHIVGNWCRRNSLEYRYTNSNLVGSENLGNLPLSHSHPLSVNDGNFESDINSCLILGTGAGTSSGSSTQLISGARFSKPFYNPKMNSVVTRNGKKALSNNMNRENIVPCGLDCNTARTGLVPFSSGCELGGSVYPLKSTNGSSQNHRWSHRFGLSETRNQRTCLYQIRNHRNNLNEMGNHRNVRLESRPWVGKFYPGLKSISNISKHLSKLWSASHYQKEGLARTTEGGPNSQIDSYSVLYGKPNPKECHLAYHGASTAMAERTLLSQEPLEKLSPCTRALNTQIDLLGGPSSEQNEVLPIQTLYNNLEMPMNKQDFYVLNEALYLMDQQEALEKPSPCSRALDTQIDLLTGSISKQHEVSNQTYNSNLEIPMNEQDYYDINEEPYPMDQHEVEITTALGCNGKFSDVEAGCKSFSYRQNGPCTVQGGIASCVDLSLHNLSLSSSKHVEPPPVSSPHNANFSEVLLKPQSKPYDLMDEEHFSSSPQVEKSSGVASLSTSQNEAKMGKDIDKKIEIEQDPQSGLSSNEKEHIKKMDKNSKLNGVIPLELAAFYTHLATRELQTIKASDLEYVKELGSGTYGTVFYGKWKGSDVAIKRIKPSCFSESTIGEDRLVADFWKEAHILGQLHHPNIVALYGVVTDGPFTSLATVTEYMVNGSLKQVLWRKDRTIDRRKRMIIAMDAAFGMQYLHEKSIVHFDLKSHNFLVNMRDPQRPVCKIGDLGLSKIKQKTLVSGGVRGTIPWMAPELLISKNMVTEKVDVYSFGIVMWELLTGEEPYSNLRSEEIIAGIIKGNLRPEIPHWCDPTWRSVMERCWSSDPDARPTFSEIAKELRAMAAAMNIK

Gene family

Gene family	subfamily
Protein Kinases Family	TKL-Pl-6

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0005515	molecular_function	protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	2.371
	SRR8316896	Juvenile bud stage	5.807
	SRR8316897	Juvenile bud stage	2.314
	SRR8316894	Third green stage	1.861
	SRR8316900	Third green stage	4.153
	SRR8316901	Third green stage	3.635
	SRR8316898	Complete white stage	1.851
	SRR8316899	Complete white stage	1.671
	SRR8316903	Complete white stage	2.787
	SRR8316902	Silver flowering stage	2.556
	SRR8316904	Silver flowering stage	6.465
	SRR8316905	Silver flowering stage	3.267
	SRR8316906	Gold flowering stage	8.013
	SRR8316907	Gold flowering stage	5.632
	SRR8316908	Gold flowering stage	6.227
SRP132670	SRR6706286	Control	4.038
	SRR6706287	Light intensity 50%	3.761
	SRR6706288	Light intensity 20%	3.934
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	3.072
	CNS0095593	Slightly white alabastrum(diploid) 2	2.058
	CNS0095594	Slightly white alabastrum(diploid) 3	2.679
	CNS0095595	Whole white alabastrum(diploid) 2	1.570
	CNS0095596	Whole white alabastrum(diploid) 3	1.497
	CNS0095597	Whole white alabastrum(diploid) 4	1.190
	CNS0095598	Silvery flower (diploied) 1	1.008
	CNS0095599	Silvery flower (diploied) 2	0.844
	CNS0095600	Silvery flower (diploied) 3	7.886
	CNS0095601	Golden flower (diploid) 1	0.744
	CNS0095602	Golden flower (diploid) 2	4.668
	CNS0095603	Golden flower (diploid) 3	4.262
	CNS0095604	Slightly white alabastrum(tetraploid) 1	3.713
	CNS0095605	Slightly white alabastrum(tetraploid) 2	2.913
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.575
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.530
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.526
	CNS0095609	Whole white alabastrum(tetraploid) 3	3.579
	CNS0095610	Silvery flower (diploied) 1	1.583
	CNS0095611	Silvery flower (diploied) 2	1.631
	CNS0095612	Silvery flower (diploied) 3	1.985
	CNS0095613	Golden flower (tetraploid) 1	1.194
	CNS0095614	Golden flower (tetraploid) 2	2.861
	CNS0095615	Golden flower (tetraploid) 3	0.309
CRA001975	CRR073297	Stem 1	4.540
	CRR073298	Stem 2	2.922
	CRR073299	Stem 3	2.935
	CRR073300	Leaf 1	3.016
	CRR073301	Leaf 2	2.114
	CRR073302	Leaf 3	1.996
	CRR073303	Juvenile bud 1	2.299
	CRR073304	Juvenile bud 2	2.192
	CRR073305	Juvenile bud 3	2.064
	CRR073306	Third green 1	1.497
	CRR073307	Third green 2	1.392
	CRR073308	Third green 3	1.975
	CRR073309	Second white 1	2.859
	CRR073310	Second white 2	3.731
	CRR073311	Second white 3	3.245
	CRR073312	Silver flowering 1	3.466
	CRR073313	Silver flowering 2	3.332
	CRR073314	Silver flowering 3	3.995
	CRR073315	Gold flowering 1	0.274
	CRR073316	Gold flowering 2	0.141
	CRR073317	Gold flowering 3	0.026
	CRR073318	Tawny withering 1	0.790
	CRR073319	Tawny withering 2	0.975
	CRR073320	Tawny withering 3	0.855