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Detail information of GWHGAAZE025760
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
CDP03185.1
0
unnamed protein product [Coffea canephora]
COG
YP_005269820.1
1E-22
serine/threonine-protein kinase PrkC
Swissprot
tr|Q1PEM5|PERK3_ARATH
1E-96
Proline-rich receptor-like protein kinase PERK3
trEMBL
tr|A0A068U3U8|A0A068U3U8_COFCA
0
Coffea canephora DH200=94 genomic scaffold, scaffold_9 {ECO:0000313|EMBL:CDP03185.1}
TAIR10
AT3G13690.1
0
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000007
gene
67338500
67345768
+
GWHAAZE00000007
mRNA
67338500
67345768
+
GWHAAZE00000007
exon
67338500
67339064
+
GWHAAZE00000007
exon
67339856
67339992
+
GWHAAZE00000007
exon
67340099
67340193
+
GWHAAZE00000007
exon
67340974
67341965
+
GWHAAZE00000007
exon
67342626
67342786
+
GWHAAZE00000007
exon
67343958
67344034
+
GWHAAZE00000007
exon
67344124
67344271
+
GWHAAZE00000007
exon
67344700
67344849
+
GWHAAZE00000007
exon
67345730
67345768
+
GWHAAZE00000007
five_prime_UTR
67338500
67338883
+
GWHAAZE00000007
CDS
67338884
67339064
+
GWHAAZE00000007
CDS
67339856
67339992
+
GWHAAZE00000007
CDS
67340099
67340193
+
GWHAAZE00000007
CDS
67340974
67341965
+
GWHAAZE00000007
CDS
67342626
67342786
+
GWHAAZE00000007
CDS
67343958
67344034
+
GWHAAZE00000007
CDS
67344124
67344271
+
GWHAAZE00000007
CDS
67344700
67344849
+
GWHAAZE00000007
CDS
67345730
67345768
+
Transcript Sequence
>GWHTAAZE025794 GAAATTTTGGCGAAGGGTTTAATTGGTTTGGGTAATTGGGTGAATTGAAATGAGGGTCTGAGGGATTTTCTTGGAAAACTCACACTTGAGGGGAAAACCCTTTTGGGAGTTTGTTGATTTTGAGCTTGTTGGGATTGATAAAATTTTGGGTTGAATGGGTTTGGTGAATTGAAATGAGGGTTTGAGTGGAATTGAAATGAGGGTTTGAGTGATTTTATTGGAAAAATCACATTATAGGCGCAGACCCTTTTGTGTTTTTTTTTTTTGATATTGAGGTTGAGCTTGTTGTGATTGGGAAAATTTTGTTGAACAGGGGTTAATGAGCTTGGAGAAATCAGTGAATTGAGATGAGGGTTTGAGTGATTTTGGGTGTTGGGTTTTGAGATGAATATGAGGCAAAAGAGTGGTAAAGAGAAGGGGTGTGATGTTGGGGAGAGAGTTGTGCTTGTTGTTGTCAAAGCATCTAAAGAGATCCCAAGAAGTGCTTTGGTGTGGGCTTTAACTCACGTTGTTCAACCTGGGGATTGTGCTAAGCTGCTTGTGGTCATCCCTGCACACAGCTCAAGCAAAAAATTATGGGGTTTACCAAGATTTAATAGTGATTGCGCTGCTGGAAATTGGAGATCTCTCTCGGGAACAATTTCAGATCAGAAAGAGGAAATTTCAGATTCTTGCACCCAGCTGATGCTTCAACTCCATGATATAAAGATGAAGATAAAAGTTGTCTCAGGCTCGTCAAGTGGAGTAGTTGCAACTGAAGCCAAGAAATCTCAAACACAATGGGTTGTATTGGATAAACAGTTGAAAAAAGAGGCGAAACTATGCATGGAACAGCTCGAATGCAATGTTGTGGTAATGAAGAAGTCCCAGCCCAAGGTTTTACGTCTAAATCTGGTTGGCTCACCTACAACGGAACCCGAGGAGCTCTCTGGATCAGAAAAATCTGCAGAACACGTGAAAAAAAACTTCGATTTGCAGAACGAAACTCGAGTTCCCAATGTGACTCCTGCCAGCAGTCCAGAGCATTCACCATTCTCCACAACCGATGTTGGAACATCGTCAATATCAAGCTTAGATCCAACGAACTCTCCATTTTTCATCTCAGAAATTAATTGGGACAGGAAAAAAGATTCTTTGGTTTATACTGATAGGATTTACAATCTTGATGAATCTGATTCTGATACGGATAGTGAAAAGATGAGTTCTCCTTCAACAAGCTTATCTTCAGATGTTCCCAGTTCCTCTGAGTTAGCGAAGTATTTGATGGGATCTTCACGAGGATCCAACGGTCTAAATTCGAGGCCCGAATCCTTGTGGGGTAAATTCTCTGAACTCGAGCGAGAGCACGAAGTTCGAGATAGGTTGAATCTCAACTCGAGCAAGAATGTGAGGGAAATGATATCGTTACCCCGAAGTTCACCCCTCGAACCTCCTCCGTTGTGTTCAATATGCCAGCACAAAGCGCCTGTTTTTGGAAAACCGCCGAGGTGGTTCACATATGGCGAGCTCGAGCACGCTACACGAAGATTCTCTGAAGCTAATTTCCTGGCTGAAGGTGGATATGGCTCTGTACACCGAGGGGTGTTACCGGATGGCCAGGTCGTCGCTGTAAAGCAGCATAAGTTGGCCAGTTCTCAGGGTGATCATGAATTTTGCTCTGAAGTCGAGGTTTTAAGCTGTGCTCAGCATCGTAATGTTGTGATGCTGATTGGATTATGTGTTGAGGATGGAAGGAGGTTGCTTGTTTATGAATATATTTGCAATGGGTCTTTGGATTCTCACCTCTATGGACATGATCGAGATCCACTAGAATGGTCGGCACGGCAAAAGATTGCAGTTGGAGCTGCCCGAGGGCTGAGGTACCTTCATGAAGAATGTAGAGTTGGTTGTATAGTACATCGTGATATGCGGCCTAACAATATTCTACTCACTCATGATTTTGAGCCATTAGTTGGAGACTTTGGACTAGCAAGGTGGCAGCCAGATGGAGATTTGGGTGTGGAAACAAGAATAATTGGAACCTTTGGGTACTTGGCTCCGGAATATGCTCAAAGTGGCGAAATTACCGAAAAGGCCGACGTGTATTCCTTTGGGATTGTATTAGTGGAACTCATCACAGGAAGGAAAGCCATAGATATAAGTCGCCCGAAGGGCCAACAGTGCCTTTCTGAATGGGCTCGTCCGTTGCTGAAAGAAAATTTTGTTGAGGAACTGGTCGATCCACGATTAAGGAAGTGCTATTCAGAGAAAGAGCTTAATAGCATGCTGCGTTGTGCTTCCATGTGCATTCGACGAGATCCTCATTTGAGGCCTCGAATGTCTCAGGTGCTACGAATGTTGGAAGGTGATAATCTCATGGACTAA
Network for GWHGAAZE025760
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF07714.18
PK_Tyr_Ser-Thr
387
652
1.50E-41
Protein Sequence
>GWHPAAZE025778 MNMRQKSGKEKGCDVGERVVLVVVKASKEIPRSALVWALTHVVQPGDCAKLLVVIPAHSSSKKLWGLPRFNSDCAAGNWRSLSGTISDQKEEISDSCTQLMLQLHDIKMKIKVVSGSSSGVVATEAKKSQTQWVVLDKQLKKEAKLCMEQLECNVVVMKKSQPKVLRLNLVGSPTTEPEELSGSEKSAEHVKKNFDLQNETRVPNVTPASSPEHSPFSTTDVGTSSISSLDPTNSPFFISEINWDRKKDSLVYTDRIYNLDESDSDTDSEKMSSPSTSLSSDVPSSSELAKYLMGSSRGSNGLNSRPESLWGKFSELEREHEVRDRLNLNSSKNVREMISLPRSSPLEPPPLCSICQHKAPVFGKPPRWFTYGELEHATRRFSEANFLAEGGYGSVHRGVLPDGQVVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGLCVEDGRRLLVYEYICNGSLDSHLYGHDRDPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEPLVGDFGLARWQPDGDLGVETRIIGTFGYLAPEYAQSGEITEKADVYSFGIVLVELITGRKAIDISRPKGQQCLSEWARPLLKENFVEELVDPRLRKCYSEKELNSMLRCASMCIRRDPHLRPRMSQVLRMLEGDNLMD
Gene family
Gene family
subfamily
Protein Kinases Family
RLK-Pelle_PERK-2
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
GO:0006468
biological_process
protein phosphorylation
GO:0004672
molecular_function
protein kinase activity
GO:0005524
molecular_function
ATP binding
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
14.067
SRR3591706
second leaf
7.376
SRR3591707
mature leaf
10.349
SRR3591708
Shoot apex
17.977
SRR3591709
Stem
22.209
SRR3591710
White floral bud
15.695
SRR3591711
White flower
15.994
SRR3591712
Green floral bud
11.089
SRR3591713
Yellow flower
11.364
SRP173429
SRR8316895
Juvenile bud stage
8.474
SRR8316896
Juvenile bud stage
10.736
SRR8316897
Juvenile bud stage
4.264
SRR8316894
Third green stage
5.861
SRR8316900
Third green stage
11.607
SRR8316901
Third green stage
11.055
SRR8316898
Complete white stage
4.088
SRR8316899
Complete white stage
17.094
SRR8316903
Complete white stage
7.316
SRR8316902
Silver flowering stage
5.088
SRR8316904
Silver flowering stage
9.889
SRR8316905
Silver flowering stage
4.275
SRR8316906
Gold flowering stage
8.253
SRR8316907
Gold flowering stage
9.471
SRR8316908
Gold flowering stage
8.859
SRP132670
SRR6706286
Control
10.253
SRR6706287
Light intensity 50%
12.280
SRR6706288
Light intensity 20%
12.752
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
5.076
CNS0095593
Slightly white alabastrum(diploid) 2
5.055
CNS0095594
Slightly white alabastrum(diploid) 3
5.208
CNS0095595
Whole white alabastrum(diploid) 2
4.524
CNS0095596
Whole white alabastrum(diploid) 3
3.476
CNS0095597
Whole white alabastrum(diploid) 4
3.819
CNS0095598
Silvery flower (diploied) 1
10.949
CNS0095599
Silvery flower (diploied) 2
8.009
CNS0095600
Silvery flower (diploied) 3
9.646
CNS0095601
Golden flower (diploid) 1
6.047
CNS0095602
Golden flower (diploid) 2
9.151
CNS0095603
Golden flower (diploid) 3
7.982
CNS0095604
Slightly white alabastrum(tetraploid) 1
4.455
CNS0095605
Slightly white alabastrum(tetraploid) 2
3.905
CNS0095606
Slightly white alabastrum(tetraploid) 3
10.642
CNS0095607
Whole white alabastrum(tetraploid) 1
3.979
CNS0095608
Whole white alabastrum(tetraploid) 2
2.326
CNS0095609
Whole white alabastrum(tetraploid) 3
4.571
CNS0095610
Silvery flower (diploied) 1
5.859
CNS0095611
Silvery flower (diploied) 2
6.631
CNS0095612
Silvery flower (diploied) 3
12.481
CNS0095613
Golden flower (tetraploid) 1
2.780
CNS0095614
Golden flower (tetraploid) 2
3.749
CNS0095615
Golden flower (tetraploid) 3
5.370
CRA001975
CRR073297
Stem 1
25.930
CRR073298
Stem 2
21.073
CRR073299
Stem 3
17.734
CRR073300
Leaf 1
18.871
CRR073301
Leaf 2
19.648
CRR073302
Leaf 3
13.455
CRR073303
Juvenile bud 1
10.838
CRR073304
Juvenile bud 2
6.663
CRR073305
Juvenile bud 3
13.047
CRR073306
Third green 1
5.842
CRR073307
Third green 2
8.190
CRR073308
Third green 3
8.780
CRR073309
Second white 1
4.168
CRR073310
Second white 2
8.209
CRR073311
Second white 3
8.206
CRR073312
Silver flowering 1
5.622
CRR073313
Silver flowering 2
2.311
CRR073314
Silver flowering 3
4.763
CRR073315
Gold flowering 1
5.677
CRR073316
Gold flowering 2
10.748
CRR073317
Gold flowering 3
4.445
CRR073318
Tawny withering 1
25.536
CRR073319
Tawny withering 2
18.055
CRR073320
Tawny withering 3
25.984