Detail information of GWHGAAZE026783


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFK47741.13.19133E-55unknown [Lotus japonicus]
COGYP_448231.10.000008transcriptional regulator
Swissprottr|Q9LXT3|MBF1B_ARATH1E-55Multiprotein-bridging factor 1b
trEMBLtr|I3T5E9|I3T5E9_LOTJA1E-55Uncharacterized protein {ECO:0000313|EMBL:AFK47741.1}
TAIR10AT3G58680.11E-38multiprotein bridging factor 1B

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1005261810054980-
GWHAAZE00000008mRNA1005261810054980-
GWHAAZE00000008exon1005261810052737-
GWHAAZE00000008exon1005284210052924-
GWHAAZE00000008exon1005346510053548-
GWHAAZE00000008exon1005489310054980-
GWHAAZE00000008CDS1005489310054980-
GWHAAZE00000008CDS1005346510053548-
GWHAAZE00000008CDS1005284210052924-
GWHAAZE00000008CDS1005261810052737-
Transcript Sequence

Network for GWHGAAZE026783

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08523.11MBF131613.00E-05
PF01381.23HTH_3691198.60E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMBF1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf57.434
SRR3591706second leaf50.461
SRR3591707mature leaf103.304
SRR3591708Shoot apex54.804
SRR3591709Stem90.479
SRR3591710White floral bud68.598
SRR3591711White flower130.277
SRR3591712Green floral bud65.634
SRR3591713Yellow flower121.587
SRP173429 SRR8316895Juvenile bud stage 0.710
SRR8316896Juvenile bud stage 1.284
SRR8316897Juvenile bud stage 29.907
SRR8316894Third green stage 1.632
SRR8316900Third green stage 1.351
SRR8316901Third green stage 1.843
SRR8316898Complete white stage 0.818
SRR8316899Complete white stage 4.481
SRR8316903Complete white stage 1.640
SRR8316902Silver flowering stage1.118
SRR8316904Silver flowering stage1.212
SRR8316905Silver flowering stage1.265
SRR8316906Gold flowering stage 9.819
SRR8316907Gold flowering stage 3.573
SRR8316908Gold flowering stage 106.125
SRP132670SRR6706286Control1.564
SRR6706287Light intensity 50%1.924
SRR6706288Light intensity 20%2.180
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.388
CNS0095593Slightly white alabastrum(diploid) 22.617
CNS0095594Slightly white alabastrum(diploid) 32.288
CNS0095595Whole white alabastrum(diploid) 22.711
CNS0095596Whole white alabastrum(diploid) 32.379
CNS0095597Whole white alabastrum(diploid) 42.926
CNS0095598Silvery flower (diploied) 13.394
CNS0095599Silvery flower (diploied) 21.826
CNS0095600Silvery flower (diploied) 31.809
CNS0095601Golden flower (diploid) 12.893
CNS0095602Golden flower (diploid) 21.843
CNS0095603Golden flower (diploid) 31.790
CNS0095604Slightly white alabastrum(tetraploid) 159.046
CNS0095605Slightly white alabastrum(tetraploid) 256.997
CNS0095606Slightly white alabastrum(tetraploid) 362.629
CNS0095607Whole white alabastrum(tetraploid) 147.570
CNS0095608Whole white alabastrum(tetraploid) 242.910
CNS0095609Whole white alabastrum(tetraploid) 360.121
CNS0095610Silvery flower (diploied) 1126.254
CNS0095611Silvery flower (diploied) 2140.970
CNS0095612Silvery flower (diploied) 3150.528
CNS0095613Golden flower (tetraploid) 1122.853
CNS0095614Golden flower (tetraploid) 2126.545
CNS0095615Golden flower (tetraploid) 3138.575
CRA001975CRR073297Stem 12.872
CRR073298Stem 22.537
CRR073299Stem 30.411
CRR073300Leaf 11.622
CRR073301Leaf 22.472
CRR073302Leaf 31.161
CRR073303Juvenile bud 10.704
CRR073304Juvenile bud 20.429
CRR073305Juvenile bud 31.177
CRR073306Third green 10.053
CRR073307Third green 20.489
CRR073308Third green 31.476
CRR073309Second white 10.000
CRR073310Second white 21.147
CRR073311Second white 30.867
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.151
CRR073315Gold flowering 11.178
CRR073316Gold flowering 22.164
CRR073317Gold flowering 30.519
CRR073318Tawny withering 12.644
CRR073319Tawny withering 22.026
CRR073320Tawny withering 32.330