Detail information of GWHGAAZE026956


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003540829.12.67935E-22PREDICTED: condensin complex subunit 2-like [Glycine max]
Swissprottr|Q564K3|CND2_ARATH4E-11Condensin complex subunit 2
trEMBLtr|I1LRN4|I1LRN4_SOYBN1E-22Condensin complex subunit 2 {ECO:0000256|PIRNR:PIRNR017126}
TAIR10AT2G32590.10.000002Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1277108612771418-
GWHAAZE00000008mRNA1277108612771418-
GWHAAZE00000008exon1277108612771095-
GWHAAZE00000008exon1277119812771418-
GWHAAZE00000008CDS1277119812771418-
GWHAAZE00000008CDS1277108612771095-
Transcript Sequence

Network for GWHGAAZE026956

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06676BRRN1, BRN1, CAPH Cell cycle - yeast map04111

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.974
SRR3591706second leaf0.063
SRR3591707mature leaf0.000
SRR3591708Shoot apex20.253
SRR3591709Stem4.017
SRR3591710White floral bud0.821
SRR3591711White flower0.602
SRR3591712Green floral bud1.064
SRR3591713Yellow flower0.902
SRP173429 SRR8316895Juvenile bud stage 1.448
SRR8316896Juvenile bud stage 3.138
SRR8316897Juvenile bud stage 2.100
SRR8316894Third green stage 1.845
SRR8316900Third green stage 2.024
SRR8316901Third green stage 1.187
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 1.489
SRR8316903Complete white stage 0.229
SRR8316902Silver flowering stage0.159
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.495
SRR8316908Gold flowering stage 0.265
SRP132670SRR6706286Control4.079
SRR6706287Light intensity 50%2.761
SRR6706288Light intensity 20%2.965
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.084
CNS0095593Slightly white alabastrum(diploid) 20.486
CNS0095594Slightly white alabastrum(diploid) 30.893
CNS0095595Whole white alabastrum(diploid) 20.354
CNS0095596Whole white alabastrum(diploid) 30.261
CNS0095597Whole white alabastrum(diploid) 41.694
CNS0095598Silvery flower (diploied) 10.427
CNS0095599Silvery flower (diploied) 22.220
CNS0095600Silvery flower (diploied) 30.945
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.525
CNS0095603Golden flower (diploid) 30.931
CNS0095604Slightly white alabastrum(tetraploid) 10.774
CNS0095605Slightly white alabastrum(tetraploid) 21.980
CNS0095606Slightly white alabastrum(tetraploid) 34.345
CNS0095607Whole white alabastrum(tetraploid) 10.125
CNS0095608Whole white alabastrum(tetraploid) 20.194
CNS0095609Whole white alabastrum(tetraploid) 31.041
CNS0095610Silvery flower (diploied) 10.000
CNS0095611Silvery flower (diploied) 20.920
CNS0095612Silvery flower (diploied) 30.211
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.165
CRA001975CRR073297Stem 110.129
CRR073298Stem 25.046
CRR073299Stem 35.564
CRR073300Leaf 14.076
CRR073301Leaf 21.958
CRR073302Leaf 30.918
CRR073303Juvenile bud 11.994
CRR073304Juvenile bud 20.373
CRR073305Juvenile bud 31.669
CRR073306Third green 10.196
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.248
CRR073317Gold flowering 30.127
CRR073318Tawny withering 13.400
CRR073319Tawny withering 21.932
CRR073320Tawny withering 33.297