Gene detail

Detail information of GWHGAAZE027352

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010061415.1	0	PREDICTED: fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [Eucalyptus grandis]
COG	YP_922211.1	8E-121	fructose-bisphosphate aldolase
Swissprot	tr\|P46256\|ALF1_PEA	0	Fructose-bisphosphate aldolase, cytoplasmic isozyme 1
trEMBL	tr\|A0A059BQ87\|A0A059BQ87_EUCGR	0	Fructose-bisphosphate aldolase {ECO:0000256\|RuleBase:RU003994}
TAIR10	AT4G26530.2	0	Aldolase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	18138617	18140084	+
GWHAAZE00000008	mRNA	18138617	18140084	+
GWHAAZE00000008	exon	18138617	18138644	+
GWHAAZE00000008	exon	18138805	18139487	+
GWHAAZE00000008	exon	18139722	18140084	+
GWHAAZE00000008	CDS	18138617	18138644	+
GWHAAZE00000008	CDS	18138805	18139487	+
GWHAAZE00000008	CDS	18139722	18140084	+

Transcript Sequence
>GWHTAAZE027386 ATGTCGGCCTTCCTAGGAAAATATGCTGATGAACTGATAAAGAATGCCAAGTACATTGCCACCCCAGGGAAGGGCATTTTAGCTGCAGACGAGAGCACCGGCACCATTGGTAAGCGTCTCTCTAGCATTAACGTTGAGAACATTGAGTCCAACCGCCAAGCTCTGCGCCAACTCCTCTTCACATCTCCCGGTGCACTTCCCTACCTCTCCGGGGTCATCCTCTTCGAAGAAACCTTGTACCAGAAAACCTCCGATGGAAAGCCTTTTGTCGATCTCCTCCTAGAAAACAATGTCATTCCGGGAATTAAGGTTGACAAAGGCACGGTTGAATTAGCCGGTACAAATGGTGAGACCACTACTCAGGGCTTCGACTCACTTGGGGCCCGCTGCCAGCAGTACTACAAGGCCGGTGCCCGGTTCGCCAAGTGGCGTGCTGTCCTCAAGATTGGCCCCACCGAGCCTTCTGAGCTGTCAATCCAGCAAAACGCTCAGGGGTTGGCCCGCTACGCAATCATTTGTCAGGAGAATGGGCTGGTGCCGATTGTTGAGCCAGAGATACTGACTGATGGGAGCCATGATGTGAAGAAATGTGCTGCTGCCACTGAGATGGTGCTTGCAGCAGTTTACAAGGCATTGAATGAGCAACATGTTCTTCTTGAGGGAACACTCTTGAAGCCCAATATGGTCACACCTGGCTCTAATAGCCCTAAGGTAACACCAGAAGTGATAGCAGAGTACACAGTGACAGCGCTGCGCCGAACTGTACCACCAGCAGTACCGGGGATAGTGTTTCTGTCAGGGGGACAGAGTGAGGAAGAGGCAACTGTGAACCTAAATGCAATGAACAAATTGGAGGTGTTGAAGCCGTGGACGCTTTCATTCTCGTTCGGACGAGCACTGCAGTCGAGTACACTGAAGACATGGGGAGGGAAAAAAGAGAATGTTGGGTTAGCTCAAGAGGCATTCTTGGCAAGGTGCAAGGCTAATTCTGAGGCCACACTTGGAACCTACACTGGTGGCAAGGCTGGTGGTTTGGCTTCAGAGAGTTTGTATGTCGAGGGGTACAAGTACTAA

Network for GWHGAAZE027352

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00274.20	Glycolytic	11	357	2.50E-171

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01623	ALDO	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Biosynthesis of amino acids	map01230
		Glycolysis / Gluconeogenesis	map00010
		Pentose phosphate pathway	map00030
		Fructose and mannose metabolism	map00051
		Carbon fixation in photosynthetic organisms	map00710
		Methane metabolism	map00680
		HIF-1 signaling pathway	map04066

Gene Ontology

GO term	Ontology	Name
GO:0006096	biological_process	glycolytic process
GO:0003824	molecular_function	catalytic activity
GO:0004332	molecular_function	fructose-bisphosphate aldolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	2.066
	SRR3591706	second leaf	551.457
	SRR3591707	mature leaf	609.911
	SRR3591708	Shoot apex	23.372
	SRR3591709	Stem	6.572
	SRR3591710	White floral bud	0.752
	SRR3591711	White flower	0.452
	SRR3591712	Green floral bud	0.969
	SRR3591713	Yellow flower	0.609
SRP173429	SRR8316895	Juvenile bud stage	0.879
	SRR8316896	Juvenile bud stage	1.471
	SRR8316897	Juvenile bud stage	0.727
	SRR8316894	Third green stage	0.337
	SRR8316900	Third green stage	0.626
	SRR8316901	Third green stage	0.933
	SRR8316898	Complete white stage	0.204
	SRR8316899	Complete white stage	0.210
	SRR8316903	Complete white stage	0.270
	SRR8316902	Silver flowering stage	0.111
	SRR8316904	Silver flowering stage	0.128
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.140
	SRR8316907	Gold flowering stage	0.113
	SRR8316908	Gold flowering stage	0.071
SRP132670	SRR6706286	Control	0.529
	SRR6706287	Light intensity 50%	0.437
	SRR6706288	Light intensity 20%	0.634
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.342
	CNS0095593	Slightly white alabastrum(diploid) 2	0.339
	CNS0095594	Slightly white alabastrum(diploid) 3	1.034
	CNS0095595	Whole white alabastrum(diploid) 2	0.113
	CNS0095596	Whole white alabastrum(diploid) 3	0.094
	CNS0095597	Whole white alabastrum(diploid) 4	0.109
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.180
	CNS0095600	Silvery flower (diploied) 3	0.327
	CNS0095601	Golden flower (diploid) 1	0.199
	CNS0095602	Golden flower (diploid) 2	0.552
	CNS0095603	Golden flower (diploid) 3	0.080
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.293
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.051
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.109
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.222
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.031
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.320
	CNS0095610	Silvery flower (diploied) 1	0.289
	CNS0095611	Silvery flower (diploied) 2	0.000
	CNS0095612	Silvery flower (diploied) 3	0.146
	CNS0095613	Golden flower (tetraploid) 1	0.087
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.133
CRA001975	CRR073297	Stem 1	2.729
	CRR073298	Stem 2	2.319
	CRR073299	Stem 3	2.102
	CRR073300	Leaf 1	1.474
	CRR073301	Leaf 2	1.364
	CRR073302	Leaf 3	1.026
	CRR073303	Juvenile bud 1	0.349
	CRR073304	Juvenile bud 2	0.200
	CRR073305	Juvenile bud 3	0.106
	CRR073306	Third green 1	0.721
	CRR073307	Third green 2	0.037
	CRR073308	Third green 3	0.741
	CRR073309	Second white 1	0.114
	CRR073310	Second white 2	0.678
	CRR073311	Second white 3	0.604
	CRR073312	Silver flowering 1	0.111
	CRR073313	Silver flowering 2	0.538
	CRR073314	Silver flowering 3	0.962
	CRR073315	Gold flowering 1	851.833
	CRR073316	Gold flowering 2	922.840
	CRR073317	Gold flowering 3	1021.384
	CRR073318	Tawny withering 1	1.775
	CRR073319	Tawny withering 2	4.478
	CRR073320	Tawny withering 3	2.580