Gene detail

Detail information of GWHGAAZE028221

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002264437.1	3.991E-120	PREDICTED: probable glutathione S-transferase [Vitis vinifera]
COG	YP_001868965.1	2E-21	glutathione S-transferase domain-containing protein
Swissprot	tr\|P49332\|GSTXC_TOBAC	6E-113	Probable glutathione S-transferase parC
trEMBL	tr\|F6HR78\|F6HR78_VITVI	1E-120	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB57186.1}
TAIR10	AT1G78380.1	2E-73	glutathione S-transferase TAU 19

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	46943106	46944729	+
GWHAAZE00000008	mRNA	46943106	46944729	+
GWHAAZE00000008	exon	46943106	46943426	+
GWHAAZE00000008	exon	46944385	46944729	+
GWHAAZE00000008	CDS	46943106	46943426	+
GWHAAZE00000008	CDS	46944385	46944729	+

Transcript Sequence
>GWHTAAZE028255 ATGGGAGGGAGCGAGGTAATTTTGTTAGACTGTTGGGCAAGCATATTTGGGATGAGGGTGAGAATTGCTCTTGCAGAGAAAGGTATTGAGTATGAGTTCAAACAAGAGGACTTGGTTAATACCAAAAGCCCATTCCTCTTGAAGATGAACCCGGTTCACAAGAAAATCCCGGTTCTTATTCACAACGGGAAACCGGTTTGTGAGTCACTCATTGCGGTCCAGTACATAGATGAGGTGTGGAAGGATAAAGCTCCATTGTTGCCCTCTGATCCTTACCAGAGAGCTCAAGCTAGGTTTTGGGCTGACTTTATTGACAAGAAGGTATATGATCATGGACCTAAGATATGGAAAACAAAAGGTGAAGAACAAGAGGAAAACAAGAAAGGGTTAATAGAGTGCCTAAAATTACTAGAGGGAGAGCTAGGGGAGAAGCATTACTTTGGAGGTGAGAGTTTTGGGTATTTGGACATAGCTTTGGTCCCATTTTACTGCTTGTTTTACACCTATGAGACCTTTGGAAAATTCAGCATAGAGGCAGAGTGCCCCACATTGATAGGGTGGGTCAAGAGGTGCATGGACAGGGAGAGTGTCTCAAAGTCCCTTGCTGATCCCCACATGGTCCATGACTTAGTTCTTTTCTTGAAAAAGAAGCTTGGCCTTGAGTAG

Network for GWHGAAZE028221

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02798.21	GST_N	5	78	1.30E-17
PF00043.26	GST_C	114	195	4.40E-09

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00799	GST, gst	Metabolic pathways	map01100
		Glutathione metabolism	map00480
		Metabolism of xenobiotics by cytochrome P450	map00980
		Drug metabolism - cytochrome P450	map00982
		Drug metabolism - other enzymes	map00983
		Longevity regulating pathway - worm	map04212

Gene Ontology

GO term	Ontology	Name
GO:0005515	molecular_function	protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.062
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.447
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.600
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.102
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.107
	SRR8316898	Complete white stage	0.344
	SRR8316899	Complete white stage	0.155
	SRR8316903	Complete white stage	0.625
	SRR8316902	Silver flowering stage	0.055
	SRR8316904	Silver flowering stage	0.790
	SRR8316905	Silver flowering stage	0.580
	SRR8316906	Gold flowering stage	2.149
	SRR8316907	Gold flowering stage	1.559
	SRR8316908	Gold flowering stage	0.773
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.096
	SRR6706288	Light intensity 20%	0.191
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.065
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.427
	CNS0095603	Golden flower (diploid) 3	0.163
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (diploied) 1	0.000
	CNS0095611	Silvery flower (diploied) 2	0.056
	CNS0095612	Silvery flower (diploied) 3	0.063
	CNS0095613	Golden flower (tetraploid) 1	0.269
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.521
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.225
	CRR073302	Leaf 3	0.124
	CRR073303	Juvenile bud 1	0.148
	CRR073304	Juvenile bud 2	0.056
	CRR073305	Juvenile bud 3	0.069
	CRR073306	Third green 1	0.676
	CRR073307	Third green 2	0.272
	CRR073308	Third green 3	0.463
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.033
	CRR073311	Second white 3	0.091
	CRR073312	Silver flowering 1	0.442
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.374
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.341
	CRR073319	Tawny withering 2	0.233
	CRR073320	Tawny withering 3	0.291