Detail information of GWHGAAZE029320


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007031026.11.0393E-163Calcineurin-like metallo-phosphoesterase superfamily protein isoform 1 [Theobroma cacao]
COGYP_008797523.15E-42protein phosphatase
Swissprottr|P48490|PP1_PHAVU3E-162Serine/threonine-protein phosphatase PP1
trEMBLtr|A0A061FAK9|A0A061FAK9_THECC4E-164Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}
TAIR10AT5G27840.29E-127Calcineurin-like metallo-phosphoesterase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene1866629618671746-
GWHAAZE00000009mRNA1866629618671746-
GWHAAZE00000009exon1867173418671746-
GWHAAZE00000009exon1866793418668493-
GWHAAZE00000009exon1866704218667233-
GWHAAZE00000009exon1866629618666325-
GWHAAZE00000009CDS1867173418671746-
GWHAAZE00000009CDS1866793418668493-
GWHAAZE00000009CDS1866704218667233-
GWHAAZE00000009CDS1866629618666325-
Transcript Sequence

Network for GWHGAAZE029320

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00149.29Metallophos41921.30E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06269PPP1C mRNA surveillance pathway map03015
Hippo signaling pathwaymap04390
cAMP signaling pathwaymap04024
cGMP-PKG signaling pathwaymap04022
Meiosis - yeastmap04113
Oocyte meiosismap04114
Cellular senescencemap04218
Focal adhesionmap04510
Regulation of actin cytoskeletonmap04810
Platelet activationmap04611
Insulin signaling pathwaymap04910
Oxytocin signaling pathwaymap04921
Adrenergic signaling in cardiomyocytesmap04261
Vascular smooth muscle contractionmap04270
Dopaminergic synapsemap04728
Long-term potentiationmap04720
Inflammatory mediator regulation of TRP channelsmap04750

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.798
SRR3591706second leaf1.109
SRR3591707mature leaf0.177
SRR3591708Shoot apex0.219
SRR3591709Stem1.368
SRR3591710White floral bud21.630
SRR3591711White flower11.754
SRR3591712Green floral bud25.706
SRR3591713Yellow flower16.099
SRP173429 SRR8316895Juvenile bud stage 3.090
SRR8316896Juvenile bud stage 4.271
SRR8316897Juvenile bud stage 1.615
SRR8316894Third green stage 2.157
SRR8316900Third green stage 10.078
SRR8316901Third green stage 10.683
SRR8316898Complete white stage 3.527
SRR8316899Complete white stage 6.775
SRR8316903Complete white stage 4.885
SRR8316902Silver flowering stage3.301
SRR8316904Silver flowering stage4.100
SRR8316905Silver flowering stage1.541
SRR8316906Gold flowering stage 7.320
SRR8316907Gold flowering stage 7.052
SRR8316908Gold flowering stage 8.594
SRP132670SRR6706286Control5.268
SRR6706287Light intensity 50%5.852
SRR6706288Light intensity 20%5.192
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.130
CNS0095593Slightly white alabastrum(diploid) 25.691
CNS0095594Slightly white alabastrum(diploid) 37.547
CNS0095595Whole white alabastrum(diploid) 210.897
CNS0095596Whole white alabastrum(diploid) 312.596
CNS0095597Whole white alabastrum(diploid) 414.597
CNS0095598Silvery flower (diploied) 11.922
CNS0095599Silvery flower (diploied) 24.467
CNS0095600Silvery flower (diploied) 35.268
CNS0095601Golden flower (diploid) 14.161
CNS0095602Golden flower (diploid) 25.656
CNS0095603Golden flower (diploid) 35.390
CNS0095604Slightly white alabastrum(tetraploid) 16.296
CNS0095605Slightly white alabastrum(tetraploid) 26.449
CNS0095606Slightly white alabastrum(tetraploid) 32.097
CNS0095607Whole white alabastrum(tetraploid) 19.643
CNS0095608Whole white alabastrum(tetraploid) 29.714
CNS0095609Whole white alabastrum(tetraploid) 35.585
CNS0095610Silvery flower (diploied) 13.357
CNS0095611Silvery flower (diploied) 22.210
CNS0095612Silvery flower (diploied) 31.669
CNS0095613Golden flower (tetraploid) 12.038
CNS0095614Golden flower (tetraploid) 23.870
CNS0095615Golden flower (tetraploid) 31.037
CRA001975CRR073297Stem 12.995
CRR073298Stem 23.508
CRR073299Stem 33.447
CRR073300Leaf 18.552
CRR073301Leaf 25.793
CRR073302Leaf 34.116
CRR073303Juvenile bud 15.151
CRR073304Juvenile bud 26.507
CRR073305Juvenile bud 31.589
CRR073306Third green 12.839
CRR073307Third green 22.697
CRR073308Third green 32.337
CRR073309Second white 11.439
CRR073310Second white 22.554
CRR073311Second white 31.917
CRR073312Silver flowering 14.317
CRR073313Silver flowering 25.056
CRR073314Silver flowering 33.519
CRR073315Gold flowering 11.971
CRR073316Gold flowering 20.355
CRR073317Gold flowering 30.526
CRR073318Tawny withering 15.585
CRR073319Tawny withering 25.346
CRR073320Tawny withering 31.647