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Detail information of GWHGAAZE029493
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_006431373.1
2.1404E-178
hypothetical protein CICLE_v10000176mg [Citrus clementina]
COG
YP_004775215.1
2E-39
RHS repeat-associated core domain-containing protein
Swissprot
tr|Q9LT96|Y5977_ARATH
1E-121
Probable leucine-rich repeat receptor-like protein kinase At5g49770 (Precursor)
trEMBL
tr|I1KNP6|I1KNP6_SOYBN
0
Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G40100.1}
TAIR10
AT1G79620.1
1E-104
Leucine-rich repeat protein kinase family protein
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000009
gene
24143377
24148864
-
GWHAAZE00000009
mRNA
24143377
24148864
-
GWHAAZE00000009
exon
24143377
24143619
-
GWHAAZE00000009
exon
24143948
24144084
-
GWHAAZE00000009
exon
24144168
24144370
-
GWHAAZE00000009
exon
24144696
24144893
-
GWHAAZE00000009
exon
24145542
24145676
-
GWHAAZE00000009
exon
24145815
24145886
-
GWHAAZE00000009
exon
24146145
24146213
-
GWHAAZE00000009
exon
24146305
24146376
-
GWHAAZE00000009
exon
24146475
24146546
-
GWHAAZE00000009
exon
24146785
24146859
-
GWHAAZE00000009
exon
24146955
24147116
-
GWHAAZE00000009
exon
24147802
24147873
-
GWHAAZE00000009
exon
24147957
24148031
-
GWHAAZE00000009
exon
24148369
24148440
-
GWHAAZE00000009
exon
24148647
24148767
-
GWHAAZE00000009
exon
24148861
24148864
-
GWHAAZE00000009
CDS
24148861
24148864
-
GWHAAZE00000009
CDS
24148647
24148767
-
GWHAAZE00000009
CDS
24148369
24148440
-
GWHAAZE00000009
CDS
24147957
24148031
-
GWHAAZE00000009
CDS
24147802
24147873
-
GWHAAZE00000009
CDS
24146955
24147116
-
GWHAAZE00000009
CDS
24146785
24146859
-
GWHAAZE00000009
CDS
24146475
24146546
-
GWHAAZE00000009
CDS
24146305
24146376
-
GWHAAZE00000009
CDS
24146145
24146213
-
GWHAAZE00000009
CDS
24145815
24145886
-
GWHAAZE00000009
CDS
24145542
24145676
-
GWHAAZE00000009
CDS
24144696
24144893
-
GWHAAZE00000009
CDS
24144168
24144370
-
GWHAAZE00000009
CDS
24143948
24144084
-
GWHAAZE00000009
CDS
24143377
24143619
-
Transcript Sequence
>GWHTAAZE029527 ATGGCTACTTATCTATCGGCTCTAAAGGATATATGGGAGAACACACCACCAAATTGGGTTGGCACGGATCCATGTGGAGATCACTGGGAAGGAATTGGTTGCACCAATTCGCGTGTTACTTCAATAACATTACTAAGCATGAATTTGACTGGTACACTATCCGGAGACATCCCGAATTTATCTGAATTGCAGACCCTGGATCTGTCATACAATACAGGTTTGACCGGACCTATTCGTCCATCAATTGGAAAGTTGACGAAGTTATCAACCTTAAACCTGGCTGGTTGCGGTTTCACCGGTCCAATTCCAGACTCGATAGGATCCCTTCAGCAGCTGGTGTTTTTGTCTCTAAATAATAATGGCCTCAGTGGATCAATACCGGCTTCATTTGGTAATCTAACTAATCTTTATTGGTTGGATTTGGCCTCTAATAGACTTAGTGGACCGATACCAGTTTCTAATGGAAGCAGGCCTGGACTCGATATGCTGGTTAAAACACAGCACTTTCATCTAGGAGGGAATCGGCTTTCTGGTGAAATCCCAAGTCAGCTCTTCAGCTTGTCTTTGACCTTAATACATCTGCTTTTAGAAAACAACCAACTCACCGGCAGCATCCCTTCCACACTAGGACTTGTGCAGACCTTGGAGGTTGTTCGTCTCGATAGGAATTTGTTAACTGGATCTGTTCCATCAAACATCAACAACCTTAGCAGTGTCAGTGATCTGTTCCTGTCCAATAATAGACTGACTGGCGCGTTGCCCAATCTTACGGGCCTGGGCTTCCTCCACTATGTAATGTTGCAAAACACAACACTTCAAGGATCAGTACCAGTCGAACTCTTTAGCGCTCCTCAATTACAAACTGTTGTATTGAGAAACAACCAGCTTAATGGCACCTTGGATATTGGGTCCAGCTTTAGCAGCCAACTTCAAAAGGTTGATTTGCAGAATAATCTCATCAGTGGCTTCACACAAAGGGCGGGAAACAATATTGGGTTAACACTTGCTAGTAACCCTGTTTGTGAGGAAGAAAGAACAATAGACGAAAAATACTGTAACGTTACTCAACAGCCTACTGATTCGTATTCAACATTACCAAGAAATTGTGAGCCTAGTACCTGCAGCTCAGGGAAAATTTCAAGCCCAAATTGTCAATGTGCATATCCATACACAGGGAAAATAACATTTAGAGCTCCTAGTTTGTTTCAATTAACAATGCTCAAAATTTTGCTTCTCTCCCAAGGTCTTAGAACAGAACACAAGTCATCATCAAATACCGGCATTATCATTGGAGCAGCAGCTGGTGGTGCTGGCCTTTTGCTATTACTACTACTTGCAGGATTTTACGCTTATCGTCAAAAGAGAAGGGCTGAAAGAGCTGATCATCAGAACAATCCCTTTGCATTGTGGGACCCAAGTAAAAACAGTGGCGGCGTTCCTCAGTTAAAAGGAGCAAGGTCTTTCTCATTTGAAGAACTTAAGAAATACACAAATAATTTTTCAGAAACCAACAATATTGGATCCGGCGGCTACGGAATGGTATATAGAGGAGATCTTCCGAATGGGCAACTGATTGCCATTAAAAGGGCCGTACAAGGGTCTACGCAGGGTGCCCTCGAGTTTAAAACCGAGATTGAGCTCCTTTCGAGGGTTCATCACAAAAATGTTGTCAGCCTTGTGGGTTTCTGTTTCGAGCAAGGTGAACAGATGCTGGTATATGAGTATATTCCAAATGGTACACTCAGGGACAGTCTTTCAGGTACTTCTTACACTCATTCATAA
Network for GWHGAAZE029493
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF13855.7
LRR_8
87
146
2.50E-06
PF07714.18
PK_Tyr_Ser-Thr
503
586
6.10E-14
Protein Sequence
>GWHPAAZE029511 MATYLSALKDIWENTPPNWVGTDPCGDHWEGIGCTNSRVTSITLLSMNLTGTLSGDIPNLSELQTLDLSYNTGLTGPIRPSIGKLTKLSTLNLAGCGFTGPIPDSIGSLQQLVFLSLNNNGLSGSIPASFGNLTNLYWLDLASNRLSGPIPVSNGSRPGLDMLVKTQHFHLGGNRLSGEIPSQLFSLSLTLIHLLLENNQLTGSIPSTLGLVQTLEVVRLDRNLLTGSVPSNINNLSSVSDLFLSNNRLTGALPNLTGLGFLHYVMLQNTTLQGSVPVELFSAPQLQTVVLRNNQLNGTLDIGSSFSSQLQKVDLQNNLISGFTQRAGNNIGLTLASNPVCEEERTIDEKYCNVTQQPTDSYSTLPRNCEPSTCSSGKISSPNCQCAYPYTGKITFRAPSLFQLTMLKILLLSQGLRTEHKSSSNTGIIIGAAAGGAGLLLLLLLAGFYAYRQKRRAERADHQNNPFALWDPSKNSGGVPQLKGARSFSFEELKKYTNNFSETNNIGSGGYGMVYRGDLPNGQLIAIKRAVQGSTQGALEFKTEIELLSRVHHKNVVSLVGFCFEQGEQMLVYEYIPNGTLRDSLSGTSYTHS
Gene family
Gene family
subfamily
Protein Kinases Family
RLK-Pelle_LRR-VIII-1
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
GO:0006468
biological_process
protein phosphorylation
GO:0005524
molecular_function
ATP binding
GO:0005515
molecular_function
protein binding
GO:0004672
molecular_function
protein kinase activity
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
6.173
SRR3591706
second leaf
12.307
SRR3591707
mature leaf
2.391
SRR3591708
Shoot apex
18.203
SRR3591709
Stem
5.524
SRR3591710
White floral bud
9.193
SRR3591711
White flower
4.120
SRR3591712
Green floral bud
10.616
SRR3591713
Yellow flower
0.428
SRP173429
SRR8316895
Juvenile bud stage
5.557
SRR8316896
Juvenile bud stage
7.009
SRR8316897
Juvenile bud stage
2.268
SRR8316894
Third green stage
2.607
SRR8316900
Third green stage
4.944
SRR8316901
Third green stage
6.466
SRR8316898
Complete white stage
1.212
SRR8316899
Complete white stage
4.774
SRR8316903
Complete white stage
2.832
SRR8316902
Silver flowering stage
0.369
SRR8316904
Silver flowering stage
0.582
SRR8316905
Silver flowering stage
0.117
SRR8316906
Gold flowering stage
0.518
SRR8316907
Gold flowering stage
0.880
SRR8316908
Gold flowering stage
0.407
SRP132670
SRR6706286
Control
5.245
SRR6706287
Light intensity 50%
5.632
SRR6706288
Light intensity 20%
6.037
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
2.233
CNS0095593
Slightly white alabastrum(diploid) 2
1.175
CNS0095594
Slightly white alabastrum(diploid) 3
3.037
CNS0095595
Whole white alabastrum(diploid) 2
0.867
CNS0095596
Whole white alabastrum(diploid) 3
0.638
CNS0095597
Whole white alabastrum(diploid) 4
1.473
CNS0095598
Silvery flower (diploied) 1
3.844
CNS0095599
Silvery flower (diploied) 2
2.105
CNS0095600
Silvery flower (diploied) 3
1.284
CNS0095601
Golden flower (diploid) 1
1.911
CNS0095602
Golden flower (diploid) 2
1.355
CNS0095603
Golden flower (diploid) 3
1.258
CNS0095604
Slightly white alabastrum(tetraploid) 1
2.652
CNS0095605
Slightly white alabastrum(tetraploid) 2
1.746
CNS0095606
Slightly white alabastrum(tetraploid) 3
9.755
CNS0095607
Whole white alabastrum(tetraploid) 1
2.209
CNS0095608
Whole white alabastrum(tetraploid) 2
0.534
CNS0095609
Whole white alabastrum(tetraploid) 3
4.384
CNS0095610
Silvery flower (diploied) 1
1.186
CNS0095611
Silvery flower (diploied) 2
0.796
CNS0095612
Silvery flower (diploied) 3
0.466
CNS0095613
Golden flower (tetraploid) 1
0.283
CNS0095614
Golden flower (tetraploid) 2
0.311
CNS0095615
Golden flower (tetraploid) 3
0.384
CRA001975
CRR073297
Stem 1
6.404
CRR073298
Stem 2
5.230
CRR073299
Stem 3
3.451
CRR073300
Leaf 1
5.371
CRR073301
Leaf 2
4.564
CRR073302
Leaf 3
2.685
CRR073303
Juvenile bud 1
1.674
CRR073304
Juvenile bud 2
2.509
CRR073305
Juvenile bud 3
2.582
CRR073306
Third green 1
0.489
CRR073307
Third green 2
0.033
CRR073308
Third green 3
0.221
CRR073309
Second white 1
0.092
CRR073310
Second white 2
0.253
CRR073311
Second white 3
0.029
CRR073312
Silver flowering 1
0.416
CRR073313
Silver flowering 2
0.255
CRR073314
Silver flowering 3
1.340
CRR073315
Gold flowering 1
0.598
CRR073316
Gold flowering 2
0.622
CRR073317
Gold flowering 3
0.529
CRR073318
Tawny withering 1
0.570
CRR073319
Tawny withering 2
0.666
CRR073320
Tawny withering 3
0.562