Gene detail

Detail information of GWHGAAZE029725

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011092409.1	0	PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Sesamum indicum]
COG	YP_004775215.1	3E-43	RHS repeat-associated core domain-containing protein
Swissprot	tr\|Q94F62\|BAK1_ARATH	0	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 (Precursor)
trEMBL	tr\|A0A068TQ37\|A0A068TQ37_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_1 {ECO:0000313\|EMBL:CDO97478.1}
TAIR10	AT4G33430.1	0	BRI1-associated receptor kinase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	31868055	31888534	+
GWHAAZE00000009	mRNA	31868055	31888534	+
GWHAAZE00000009	exon	31868055	31868282	+
GWHAAZE00000009	exon	31869009	31869141	+
GWHAAZE00000009	exon	31869450	31869521	+
GWHAAZE00000009	exon	31869728	31869871	+
GWHAAZE00000009	exon	31870569	31870640	+
GWHAAZE00000009	exon	31870772	31870843	+
GWHAAZE00000009	exon	31870930	31871006	+
GWHAAZE00000009	exon	31881545	31881677	+
GWHAAZE00000009	exon	31881988	31882059	+
GWHAAZE00000009	exon	31882266	31882409	+
GWHAAZE00000009	exon	31883126	31883197	+
GWHAAZE00000009	exon	31883329	31883400	+
GWHAAZE00000009	exon	31883487	31883563	+
GWHAAZE00000009	exon	31884667	31884798	+
GWHAAZE00000009	exon	31885643	31885984	+
GWHAAZE00000009	exon	31887019	31887413	+
GWHAAZE00000009	exon	31888217	31888534	+
GWHAAZE00000009	five_prime_UTR	31868055	31868182	+
GWHAAZE00000009	CDS	31868183	31868282	+
GWHAAZE00000009	CDS	31869009	31869141	+
GWHAAZE00000009	CDS	31869450	31869521	+
GWHAAZE00000009	CDS	31869728	31869871	+
GWHAAZE00000009	CDS	31870569	31870640	+
GWHAAZE00000009	CDS	31870772	31870843	+
GWHAAZE00000009	CDS	31870930	31871006	+
GWHAAZE00000009	CDS	31881545	31881677	+
GWHAAZE00000009	CDS	31881988	31882059	+
GWHAAZE00000009	CDS	31882266	31882409	+
GWHAAZE00000009	CDS	31883126	31883197	+
GWHAAZE00000009	CDS	31883329	31883400	+
GWHAAZE00000009	CDS	31883487	31883563	+
GWHAAZE00000009	CDS	31884667	31884798	+
GWHAAZE00000009	CDS	31885643	31885984	+
GWHAAZE00000009	CDS	31887019	31887413	+
GWHAAZE00000009	CDS	31888217	31888534	+

Transcript Sequence
>GWHTAAZE029759 CTCCATCTTAGTTTGCTCATTAATTAATTGGGTGAGTTGTTTCGGAATTAGGGTTTGTGTTTTCATTCTTCTTTTGGGGATGAGTGTGACCCAAGTCTAGGGTTTTCAGCTCAGGGGCCAAGAAAATAATGATGGATCGGTGGGTCTTGAAGATCTCGACCCGGGTTTGTTTCTTTTGGTTGATGATTGTGGTTTATGGGTTTTCTCTGGTATACGGTAATTCGGAAGGCGATGCTTTGAGTGCACTCAAGTCTAATTTGGCTGATCCAAACAATGTCCTTCAAAGTTGGGATCCCACCCTTGTCAATCCCTGCATGTGGTCTCATGTGACATGCAACATTGCAAATAGTGTCACGAGAGTTGATCTTGGAAATGCAAACTTGTCTGGTGAATTGGTTCCGCAGCTTGGTTCACTTCCTGAATTACAGTACTTGGAACTTTACAGTAATAACATAAGTGGAAGAATTCCGGTTGAGCTCGGAAACTTAACAAACTTGGTGAGCTTGGATCTTTACCTCAACAATTTAAGTGGTCCCATTCCAGACACTTTGGGCAAGCTTAAGAGGTTACGTTTCCTGAGGCTGAACAACAACAGTTTAACAGGAATAATTCCTGGGTCTTTGACTACCATTGATTCGCTTCAAGTCCTTGATCTATCAAACAACCAATTAACAGGACCAATTCCCGTCAATGGCTCGTTTTCACTCTTTACTCCCATCAGTTTTGCTAATAATCGGTTAGATCCTCTTCCTGCTTCTCCACCACCTCCACTTACTCCGACAACCCCATCTTCTCCAGGCGATGCTTTGAGTGCACTCAAGTCTAATTTGGCTGATCCAAACAATGTCCTTCAAAGTTGGGATCCTACCCTTGTCAATCCCTGCACGTGGTTTCATGTGACATGCAACAGTGCAAATAGTGTCACAAGAGTTGATCTTGGAAATGCAAACTTGTCTGGTGGATTGGTTCTGCAGCTTGGTTCACTTCCTGAATTACAGTACTTGGAACTTTACAGTAATAACATAAGTGGAAGAATTCCGGTTGAGCTCGGAAACTTAACAAACTTGGTGAGCTTGGATCTTTACCTCAACAATTTAAGTGGTCCCATTCCAGACACTTTGGGCAAGCTTAAGAGGCTACGTTTCCTGAGGCTGAACAACAACAGTTTAACAGGAATAATTCCTGGGTCTTTGACTACCATTGATTCGCTTCAAGTCCTTGATCTATCGAACAACCAATTAACAGGACCAATTCCCGTCAATGGCTCATTTTCACTCTTTACTCCCATCAGTTTTGCTAATAATCGGTTAGATCCTCTTCCTGCTTCTCCACCACCTCCACTTACTCCGACAACCCCATCTTCTCCAGTTGGGAACAGTGCCACCGGAGCCATTGCTGGAGGAGTTGCTGCTGGTGCTGCTCTGCTATTTGCCGGTCCTGCAATTGCACTTGCTTGGTGGCGCCGAAGAAAACCTGAGGACCATTTCTTCGATGTACCAGCTGAAGAGGATCCAGAAGTTCATCTAGGACAACTCAAGAGGTTTTCATTGCGTGAACTACAAGTTGCAACAGATAACTTTAGCAACAGAAATATTCTGGGAAGAGGTGGATTTGGTAAGGTTTACAAAGGACGTTTGGCTGACGGCACTCTGGTGGCCGTAAAAAGACTAAAAGAGGAGCGTACTCAAGGTGGGGAGCTCCAGTTCCAAACGGAAGTCGAAATGATAAGCATGGCTGTGCATCGTAATCTACTTCGCTTGCGAGGCTTTTGTATGACTCCCACAGAACGCGTGCTCGTTTATCCTTATATGTCTAATGGAAGTGTTGCATCATGTTTAAGAGAGCGACCAGAAATGCAATCCCCACTTGATTGGCCAAAAAGGAAGCAAATTGCACTGGGATCCGCGAGGGGCCTCGCGTATTTGCATGATCATTGTGACCCCAAGATCATTCACAGAGATGTCAAAGCTGCAAACATATTGTTGGATGAGGAGTTTGAAGCAGTAGTTGGAGACTTTGGGTTGGCTAAGCTGATGGATTACAAGGACACGCATGTTACCACTGCCGTGCGTGGCACAATTGGACATATAGCTCCCGAGTACCTTTCCACTGGAAAATCTTCAGAGAAAACCGATGTTTTCGGTTACGGGGTTATGCTTCTTGAGCTCATAACTGGACAGAGGGCTTTCGATCTTGCTCGGCTTGCCAACGATGACGACGTCATGCTGCTTGATTGGGTGAAAGGACTTCTGAAGGACAAGAAGTTAGAACCACTGGTGGACGCGGATCTGAACGGTAATTATATTGACGAAGAGGTGGAGCAGCTGATCCAGGTGGCTCTGCTCTGCACCCAGGGCTCCCCAACCGAACGCCCCAAGATGTCAGAGGTGGTTAGAATGCTTGAAGGCGATGGTTTGGCTGAGAGGTGGGAAGAGTGGCAAAAGGATGAAGTTTTCCGGCAAGAGTTCAACAACAACCTCCACCCCAATGCTGATTGGATCATTGCCGACTCCACCTACAACCTCCGGCCCGATGAATTGTCGGGCCCTAGATAA

Network for GWHGAAZE029725

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF08263.13	LRRNT_2	31	70	7.40E-10
PF13855.7	LRR_8	122	181	3.60E-07
PF08263.13	LRRNT_2	224	260	3.60E-09
PF13855.7	LRR_8	312	371	8.70E-07
PF00069.26	Pkinase	486	756	5.50E-45

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_LRR-II

KEGG pathway

KO	Enzyme	pathway	mapID
K13416	BAK1	MAPK signaling pathway - plant	map04016
		Plant hormone signal transduction	map04075
		Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0005524	molecular_function	ATP binding
GO:0004672	molecular_function	protein kinase activity
GO:0005515	molecular_function	protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	31.147
	SRR3591706	second leaf	29.499
	SRR3591707	mature leaf	40.558
	SRR3591708	Shoot apex	34.519
	SRR3591709	Stem	40.870
	SRR3591710	White floral bud	29.054
	SRR3591711	White flower	39.166
	SRR3591712	Green floral bud	28.286
	SRR3591713	Yellow flower	40.602
SRP173429	SRR8316895	Juvenile bud stage	19.567
	SRR8316896	Juvenile bud stage	28.704
	SRR8316897	Juvenile bud stage	15.256
	SRR8316894	Third green stage	10.725
	SRR8316900	Third green stage	28.304
	SRR8316901	Third green stage	28.998
	SRR8316898	Complete white stage	11.234
	SRR8316899	Complete white stage	43.405
	SRR8316903	Complete white stage	21.128
	SRR8316902	Silver flowering stage	13.830
	SRR8316904	Silver flowering stage	17.173
	SRR8316905	Silver flowering stage	9.911
	SRR8316906	Gold flowering stage	40.971
	SRR8316907	Gold flowering stage	31.245
	SRR8316908	Gold flowering stage	37.774
SRP132670	SRR6706286	Control	20.047
	SRR6706287	Light intensity 50%	21.026
	SRR6706288	Light intensity 20%	21.509
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	22.569
	CNS0095593	Slightly white alabastrum(diploid) 2	22.568
	CNS0095594	Slightly white alabastrum(diploid) 3	22.143
	CNS0095595	Whole white alabastrum(diploid) 2	19.307
	CNS0095596	Whole white alabastrum(diploid) 3	14.383
	CNS0095597	Whole white alabastrum(diploid) 4	19.991
	CNS0095598	Silvery flower (diploied) 1	24.328
	CNS0095599	Silvery flower (diploied) 2	21.456
	CNS0095600	Silvery flower (diploied) 3	33.600
	CNS0095601	Golden flower (diploid) 1	26.563
	CNS0095602	Golden flower (diploid) 2	39.282
	CNS0095603	Golden flower (diploid) 3	36.602
	CNS0095604	Slightly white alabastrum(tetraploid) 1	22.316
	CNS0095605	Slightly white alabastrum(tetraploid) 2	20.219
	CNS0095606	Slightly white alabastrum(tetraploid) 3	35.104
	CNS0095607	Whole white alabastrum(tetraploid) 1	15.812
	CNS0095608	Whole white alabastrum(tetraploid) 2	13.173
	CNS0095609	Whole white alabastrum(tetraploid) 3	24.253
	CNS0095610	Silvery flower (diploied) 1	33.209
	CNS0095611	Silvery flower (diploied) 2	34.412
	CNS0095612	Silvery flower (diploied) 3	23.099
	CNS0095613	Golden flower (tetraploid) 1	25.954
	CNS0095614	Golden flower (tetraploid) 2	34.617
	CNS0095615	Golden flower (tetraploid) 3	33.831
CRA001975	CRR073297	Stem 1	31.928
	CRR073298	Stem 2	28.878
	CRR073299	Stem 3	29.306
	CRR073300	Leaf 1	38.502
	CRR073301	Leaf 2	36.545
	CRR073302	Leaf 3	29.528
	CRR073303	Juvenile bud 1	41.032
	CRR073304	Juvenile bud 2	27.538
	CRR073305	Juvenile bud 3	45.034
	CRR073306	Third green 1	10.912
	CRR073307	Third green 2	11.839
	CRR073308	Third green 3	12.433
	CRR073309	Second white 1	22.087
	CRR073310	Second white 2	20.664
	CRR073311	Second white 3	21.421
	CRR073312	Silver flowering 1	24.051
	CRR073313	Silver flowering 2	24.557
	CRR073314	Silver flowering 3	25.345
	CRR073315	Gold flowering 1	26.245
	CRR073316	Gold flowering 2	30.991
	CRR073317	Gold flowering 3	30.269
	CRR073318	Tawny withering 1	39.210
	CRR073319	Tawny withering 2	40.012
	CRR073320	Tawny withering 3	32.666