Gene detail

Detail information of GWHGAAZE029881

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011043043.1	0	PREDICTED: fructose-1,6-bisphosphatase, chloroplastic [Populus euphratica]
COG	YP_005847608.1	8E-78	Fructose-1,6-bisphosphatase
Swissprot	tr\|P22418\|F16P1_SPIOL	8E-93	Fructose-1,6-bisphosphatase, chloroplastic (Precursor)
trEMBL	tr\|V4SIR2\|V4SIR2_9ROSI	0	Uncharacterized protein {ECO:0000313\|EMBL:ESR36936.1}
TAIR10	AT5G64380.1	1E-150	Inositol monophosphatase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	34760241	34764361	-
GWHAAZE00000009	mRNA	34760241	34764361	-
GWHAAZE00000009	exon	34763767	34764361	-
GWHAAZE00000009	exon	34761769	34762165	-
GWHAAZE00000009	exon	34760241	34760863	-
GWHAAZE00000009	five_prime_UTR	34764181	34764361	-
GWHAAZE00000009	CDS	34763767	34764180	-
GWHAAZE00000009	CDS	34761769	34762165	-
GWHAAZE00000009	CDS	34760463	34760863	-
GWHAAZE00000009	three_prime_UTR	34760241	34760462	-

Transcript Sequence
>GWHTAAZE029915 GAGGCCCAAAATAATTGGGTCATGATCCGTCTAAGAACGTACTCAATTCTTGAATTCACACAGTCACACTCCCTTTAACAAAGAAATTCAGACCAAGAGACCCCAATCTTCTTCACCCACATGCCATCAATTTCAGATATGATACAATTCACCACCATTTCCTCAATCCCTCCAACTCCCCATGCCTAGAATGCAATCACCCACCATCAGATTGCACCCTAACCCCAATTTCCCGCCAAAACTCCACCCCCTCCCGCCAAAAACCCAACACTTCCCGGCAAAATTCAACCTCCCCCGGCCAAGAATGGCCGCTTCTTTTGGTGGGCTTAGGGCTATTTCACAAACGGCCAGTAGTTCTGTGGTTAGTGATGATGATGTGTTTTCTACTCTAACAGAGTATGTGGGGAAAGGAGGGGCTAATGTGGGAGATGATTTGGTCATTCTGTTTGATCACTTGCAGTATGCTTGCAAAAAAATTGCAGCTCTTGTGGCTTCTCCGTATAATTCCAGTCTCGGCAAAAGTTCCGGTGGTGGTGCCGGTGGGGATGGTGGAGCTTCCGGCAGAGATAAGCCCAAGCCACTCGATATCGTTTCGAATGAGATTATCTTGTCTTCTCTACGGAAATCTTGTAAAGTGGCGGTTATGGCTTCAGAAGAAGATGATGCTCCTGTTTGGATAACTGATGACGGGCCGTTTGTGGTGGTGACAGATCCTCTGGACGGTTCCAGAAATATCGATGCCTCTATTCCCACTGGTACAATATTTGGTATATATAACCGTCTCGAGGAACTCGATAATCTGCAAGTGGAGGAGAAAGCAATTCTAAATTCACTCCAAAGTGGAAATAAGCTTGTTGCTGCTGCCTATGTTCTTTATTCATCAGCTACAATACTTTGCACCAGCTTCGGTTCAGGAACATATGCATTTACACTGGATCACTCGACAGGGGACTTTATTCTCACACACCCAAGTATTAAAATCCCTCCCCGAGGCCAAATCTATTCTGTAAATGATGCACGATACTTTGACTGGCCCGAAGGCTTAAGACAATATATCGACACTGTTAGACAAGGCAAAGGCAAATACCCAAAGAAGTACTCGGCTCGTTATATTTGTTCTCTTGTTGCTGATTTCCATCGAACTCTGTTGTATGGTGGAGTGGCAATGAATCCAAGGGACCATCTTCGACTCGTTTATGAGGCGAATCCTCTCAGTTTTCTAGTGGAGCAAGCTGGGGGTAGAGGTTCCGATGGTAAAAGTCGAATTTTGTCTATTCAGCCGGTAAAGTTGCACCAAAGACTTCCTTTATTTTTGGGGAGTTCGGAGGATATAGAAGAGTTGGAGAGCTATGGGGATGTTCAACAGAAAGTAAATCCTGGTTATGAGGTTTGATTCGATTATAACTGAGGATGTTTTGTATGAGTCAACTTTGGTTGGTTAAAGACTTTTCAGCTGTACATGTAAATAAATCCATAAATGTTTGTTCATTTTGTTCAACTTTTGAAGCAACTAAGCGTTAAAAGTTCTTTATGCTCTTTTGCTTTCTTACATTTTGTTAATATTAATATGTGAAATTTAGAAGTTAGTTGTTGGTTCACTCGGCGTAAAAGTGAC

Network for GWHGAAZE029881

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00316.21	FBPase	80	263	4.40E-37
PF18913.1	FBPase_C	267	390	2.90E-39

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K03841	FBP, fbp	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Glycolysis / Gluconeogenesis	map00010
		Pentose phosphate pathway	map00030
		Fructose and mannose metabolism	map00051
		Carbon fixation in photosynthetic organisms	map00710
		Methane metabolism	map00680
		AMPK signaling pathway	map04152
		Insulin signaling pathway	map04910
		Glucagon signaling pathway	map04922

Gene Ontology

GO term	Ontology	Name
GO:0005975	biological_process	carbohydrate metabolic process
GO:0016791	molecular_function	phosphatase activity
GO:0042132	molecular_function	fructose 1,6-bisphosphate 1-phosphatase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	14.736
	SRR3591706	second leaf	21.554
	SRR3591707	mature leaf	26.003
	SRR3591708	Shoot apex	22.335
	SRR3591709	Stem	13.054
	SRR3591710	White floral bud	5.046
	SRR3591711	White flower	4.836
	SRR3591712	Green floral bud	8.544
	SRR3591713	Yellow flower	2.839
SRP173429	SRR8316895	Juvenile bud stage	7.868
	SRR8316896	Juvenile bud stage	8.467
	SRR8316897	Juvenile bud stage	3.625
	SRR8316894	Third green stage	3.599
	SRR8316900	Third green stage	9.829
	SRR8316901	Third green stage	8.650
	SRR8316898	Complete white stage	3.853
	SRR8316899	Complete white stage	14.664
	SRR8316903	Complete white stage	6.574
	SRR8316902	Silver flowering stage	4.400
	SRR8316904	Silver flowering stage	5.276
	SRR8316905	Silver flowering stage	2.277
	SRR8316906	Gold flowering stage	5.289
	SRR8316907	Gold flowering stage	7.503
	SRR8316908	Gold flowering stage	3.224
SRP132670	SRR6706286	Control	11.759
	SRR6706287	Light intensity 50%	11.664
	SRR6706288	Light intensity 20%	12.377
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	6.424
	CNS0095593	Slightly white alabastrum(diploid) 2	6.575
	CNS0095594	Slightly white alabastrum(diploid) 3	5.717
	CNS0095595	Whole white alabastrum(diploid) 2	6.446
	CNS0095596	Whole white alabastrum(diploid) 3	4.861
	CNS0095597	Whole white alabastrum(diploid) 4	6.902
	CNS0095598	Silvery flower (diploied) 1	15.009
	CNS0095599	Silvery flower (diploied) 2	9.358
	CNS0095600	Silvery flower (diploied) 3	10.982
	CNS0095601	Golden flower (diploid) 1	12.407
	CNS0095602	Golden flower (diploid) 2	12.857
	CNS0095603	Golden flower (diploid) 3	10.816
	CNS0095604	Slightly white alabastrum(tetraploid) 1	5.503
	CNS0095605	Slightly white alabastrum(tetraploid) 2	5.467
	CNS0095606	Slightly white alabastrum(tetraploid) 3	9.068
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.789
	CNS0095608	Whole white alabastrum(tetraploid) 2	3.057
	CNS0095609	Whole white alabastrum(tetraploid) 3	6.507
	CNS0095610	Silvery flower (diploied) 1	7.024
	CNS0095611	Silvery flower (diploied) 2	9.139
	CNS0095612	Silvery flower (diploied) 3	3.865
	CNS0095613	Golden flower (tetraploid) 1	1.972
	CNS0095614	Golden flower (tetraploid) 2	4.759
	CNS0095615	Golden flower (tetraploid) 3	2.906
CRA001975	CRR073297	Stem 1	13.294
	CRR073298	Stem 2	11.753
	CRR073299	Stem 3	13.678
	CRR073300	Leaf 1	7.603
	CRR073301	Leaf 2	8.604
	CRR073302	Leaf 3	5.939
	CRR073303	Juvenile bud 1	8.109
	CRR073304	Juvenile bud 2	4.787
	CRR073305	Juvenile bud 3	7.319
	CRR073306	Third green 1	0.724
	CRR073307	Third green 2	1.344
	CRR073308	Third green 3	1.041
	CRR073309	Second white 1	1.995
	CRR073310	Second white 2	0.812
	CRR073311	Second white 3	0.961
	CRR073312	Silver flowering 1	0.469
	CRR073313	Silver flowering 2	0.298
	CRR073314	Silver flowering 3	1.050
	CRR073315	Gold flowering 1	35.083
	CRR073316	Gold flowering 2	37.185
	CRR073317	Gold flowering 3	36.461
	CRR073318	Tawny withering 1	10.838
	CRR073319	Tawny withering 2	6.875
	CRR073320	Tawny withering 3	7.159