Detail information of GWHGAAZE030107


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004150134.10PREDICTED: amidophosphoribosyltransferase 2, chloroplastic-like [Cucumis sativus]
COGYP_593695.14E-111amidophosphoribosyltransferase
Swissprottr|Q9STG9|ASE2_ARATH8E-178Amidophosphoribosyltransferase 2, chloroplastic (Precursor)
trEMBLtr|A0A0A0LJ70|A0A0A0LJ70_CUCSA0Uncharacterized protein {ECO:0000313|EMBL:KGN61858.1}
TAIR10AT4G34740.12E-134GLN phosphoribosyl pyrophosphate amidotransferase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3835474638355693-
GWHAAZE00000009mRNA3835474638355693-
GWHAAZE00000009exon3835474638355693-
GWHAAZE00000009CDS3835474638355693-
Transcript Sequence

Network for GWHGAAZE030107

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00156.28Pribosyltran801901.20E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00764purF, PPAT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Purine metabolismmap00230
Alanine, aspartate and glutamate metabolismmap00250

Gene Ontology

GO term OntologyName
GO:0009116biological_processnucleoside metabolic process

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.212
SRR3591706second leaf32.423
SRR3591707mature leaf42.678
SRR3591708Shoot apex13.716
SRR3591709Stem20.447
SRR3591710White floral bud17.535
SRR3591711White flower26.481
SRR3591712Green floral bud8.099
SRR3591713Yellow flower16.897
SRP173429 SRR8316895Juvenile bud stage 10.869
SRR8316896Juvenile bud stage 16.234
SRR8316897Juvenile bud stage 4.859
SRR8316894Third green stage 5.819
SRR8316900Third green stage 20.729
SRR8316901Third green stage 18.018
SRR8316898Complete white stage 8.650
SRR8316899Complete white stage 22.652
SRR8316903Complete white stage 12.080
SRR8316902Silver flowering stage7.002
SRR8316904Silver flowering stage8.109
SRR8316905Silver flowering stage4.149
SRR8316906Gold flowering stage 14.732
SRR8316907Gold flowering stage 20.663
SRR8316908Gold flowering stage 16.095
SRP132670SRR6706286Control20.217
SRR6706287Light intensity 50%20.050
SRR6706288Light intensity 20%17.565
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.303
CNS0095593Slightly white alabastrum(diploid) 227.465
CNS0095594Slightly white alabastrum(diploid) 325.627
CNS0095595Whole white alabastrum(diploid) 219.862
CNS0095596Whole white alabastrum(diploid) 319.031
CNS0095597Whole white alabastrum(diploid) 417.959
CNS0095598Silvery flower (diploied) 118.114
CNS0095599Silvery flower (diploied) 217.687
CNS0095600Silvery flower (diploied) 315.163
CNS0095601Golden flower (diploid) 18.592
CNS0095602Golden flower (diploid) 28.293
CNS0095603Golden flower (diploid) 39.195
CNS0095604Slightly white alabastrum(tetraploid) 114.366
CNS0095605Slightly white alabastrum(tetraploid) 216.002
CNS0095606Slightly white alabastrum(tetraploid) 311.091
CNS0095607Whole white alabastrum(tetraploid) 113.408
CNS0095608Whole white alabastrum(tetraploid) 29.949
CNS0095609Whole white alabastrum(tetraploid) 37.310
CNS0095610Silvery flower (diploied) 112.546
CNS0095611Silvery flower (diploied) 24.714
CNS0095612Silvery flower (diploied) 37.703
CNS0095613Golden flower (tetraploid) 18.245
CNS0095614Golden flower (tetraploid) 28.317
CNS0095615Golden flower (tetraploid) 37.216
CRA001975CRR073297Stem 114.771
CRR073298Stem 213.896
CRR073299Stem 314.560
CRR073300Leaf 114.746
CRR073301Leaf 217.940
CRR073302Leaf 317.906
CRR073303Juvenile bud 114.097
CRR073304Juvenile bud 211.574
CRR073305Juvenile bud 316.000
CRR073306Third green 112.257
CRR073307Third green 212.786
CRR073308Third green 315.928
CRR073309Second white 111.828
CRR073310Second white 211.055
CRR073311Second white 36.409
CRR073312Silver flowering 14.419
CRR073313Silver flowering 23.700
CRR073314Silver flowering 34.229
CRR073315Gold flowering 145.916
CRR073316Gold flowering 249.210
CRR073317Gold flowering 371.267
CRR073318Tawny withering 116.434
CRR073319Tawny withering 219.516
CRR073320Tawny withering 314.512