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Detail information of GWHGAAZE030107
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_004150134.1
0
PREDICTED: amidophosphoribosyltransferase 2, chloroplastic-like [Cucumis sativus]
COG
YP_593695.1
4E-111
amidophosphoribosyltransferase
Swissprot
tr|Q9STG9|ASE2_ARATH
8E-178
Amidophosphoribosyltransferase 2, chloroplastic (Precursor)
trEMBL
tr|A0A0A0LJ70|A0A0A0LJ70_CUCSA
0
Uncharacterized protein {ECO:0000313|EMBL:KGN61858.1}
TAIR10
AT4G34740.1
2E-134
GLN phosphoribosyl pyrophosphate amidotransferase 2
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000009
gene
38354746
38355693
-
GWHAAZE00000009
mRNA
38354746
38355693
-
GWHAAZE00000009
exon
38354746
38355693
-
GWHAAZE00000009
CDS
38354746
38355693
-
Transcript Sequence
>GWHTAAZE030141 ATGGGGAGGAGGAGCAATGGGGCGGTTGTTTTTGCATCTGAAACTTGTGCATTGGATTTGATTGAGGCTACTTATGAGAGAGAAGTGTACCCTGGTGAAGTAATTATTGTTGATAAAGATGGAATTCAAACACTTTGTTTGATGCCTCACCCTGAACCCAAGTCTTGTATCTTTGAGCATATTTACTTTGCTTTGCCTAGCTCTGAGGTGTTTGGGAGGTCCGTTTACGGGTCGCGCCAACTGTTTGGGGAAATTCTTGCGACAGTAGCACCAGTCGATTGCGACGTTGTGATTGCAGTGCCGGACTCCGGTGTGGTGGCGGCGCTTGGCTATGCAGCCAAGGCCGGGGTGGCTTTCCAGCAAGGCCTAATTCGGTCACATTATGTGGGGCGGACCTTTATCGAGCCATCACAAAAGATTAGGGACTTTGGGGTGAAGCTGAAGCTCTCACCAGTTAAGGCCGTCCTAGAAGGAAAGAGGGTTGTGGTTGTTGATGACTCTATCGTGAGGGGAACCACTTCGTCAAAGATAGTTAGGCTTATTAAGGAGGCGGGTGCTAAAGAAGTACACATGAGGATTGCAAGTCCTCCAATTATCGCATCTTGTTATTATGGGGTGGATACTCCAAGTGCCGAGGAGTTGATATCGAATAGGATGAATGTTGAAGAGATTAGAGAGTTTATTGGGGCTGATTCGCTTGCTTTTTTGCCAATTGATAGCTTGGAAAAGATGTTGGGGAGTGATTCTAATAATTTTTGTTATGCTTGCTTTTCGGGGAGGTACCCCGTGTTGCCAAGTGGTAAGGTGAAGAGGGTTGGCGATTTTTTGGATGATGGGTTGAATGGAAGCGTAGAATCCATTGATGGAGGGTGGATTCAACAGAACGAGGAGGCCAATTCAGAGCAGAAGGTGGAGGCTAATTCAGAGCAGAAAGTGGAGGTCAAGTAG
Network for GWHGAAZE030107
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF00156.28
Pribosyltran
80
190
1.20E-08
Protein Sequence
>GWHPAAZE030125 MGRRSNGAVVFASETCALDLIEATYEREVYPGEVIIVDKDGIQTLCLMPHPEPKSCIFEHIYFALPSSEVFGRSVYGSRQLFGEILATVAPVDCDVVIAVPDSGVVAALGYAAKAGVAFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVKAVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIASPPIIASCYYGVDTPSAEELISNRMNVEEIREFIGADSLAFLPIDSLEKMLGSDSNNFCYACFSGRYPVLPSGKVKRVGDFLDDGLNGSVESIDGGWIQQNEEANSEQKVEANSEQKVEVK
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K00764
purF, PPAT
Metabolic pathways
map01100
Biosynthesis of secondary metabolites
map01110
Purine metabolism
map00230
Alanine, aspartate and glutamate metabolism
map00250
Gene Ontology
GO term
Ontology
Name
GO:0009116
biological_process
nucleoside metabolic process
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
6.212
SRR3591706
second leaf
32.423
SRR3591707
mature leaf
42.678
SRR3591708
Shoot apex
13.716
SRR3591709
Stem
20.447
SRR3591710
White floral bud
17.535
SRR3591711
White flower
26.481
SRR3591712
Green floral bud
8.099
SRR3591713
Yellow flower
16.897
SRP173429
SRR8316895
Juvenile bud stage
10.869
SRR8316896
Juvenile bud stage
16.234
SRR8316897
Juvenile bud stage
4.859
SRR8316894
Third green stage
5.819
SRR8316900
Third green stage
20.729
SRR8316901
Third green stage
18.018
SRR8316898
Complete white stage
8.650
SRR8316899
Complete white stage
22.652
SRR8316903
Complete white stage
12.080
SRR8316902
Silver flowering stage
7.002
SRR8316904
Silver flowering stage
8.109
SRR8316905
Silver flowering stage
4.149
SRR8316906
Gold flowering stage
14.732
SRR8316907
Gold flowering stage
20.663
SRR8316908
Gold flowering stage
16.095
SRP132670
SRR6706286
Control
20.217
SRR6706287
Light intensity 50%
20.050
SRR6706288
Light intensity 20%
17.565
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
22.303
CNS0095593
Slightly white alabastrum(diploid) 2
27.465
CNS0095594
Slightly white alabastrum(diploid) 3
25.627
CNS0095595
Whole white alabastrum(diploid) 2
19.862
CNS0095596
Whole white alabastrum(diploid) 3
19.031
CNS0095597
Whole white alabastrum(diploid) 4
17.959
CNS0095598
Silvery flower (diploied) 1
18.114
CNS0095599
Silvery flower (diploied) 2
17.687
CNS0095600
Silvery flower (diploied) 3
15.163
CNS0095601
Golden flower (diploid) 1
8.592
CNS0095602
Golden flower (diploid) 2
8.293
CNS0095603
Golden flower (diploid) 3
9.195
CNS0095604
Slightly white alabastrum(tetraploid) 1
14.366
CNS0095605
Slightly white alabastrum(tetraploid) 2
16.002
CNS0095606
Slightly white alabastrum(tetraploid) 3
11.091
CNS0095607
Whole white alabastrum(tetraploid) 1
13.408
CNS0095608
Whole white alabastrum(tetraploid) 2
9.949
CNS0095609
Whole white alabastrum(tetraploid) 3
7.310
CNS0095610
Silvery flower (diploied) 1
12.546
CNS0095611
Silvery flower (diploied) 2
4.714
CNS0095612
Silvery flower (diploied) 3
7.703
CNS0095613
Golden flower (tetraploid) 1
8.245
CNS0095614
Golden flower (tetraploid) 2
8.317
CNS0095615
Golden flower (tetraploid) 3
7.216
CRA001975
CRR073297
Stem 1
14.771
CRR073298
Stem 2
13.896
CRR073299
Stem 3
14.560
CRR073300
Leaf 1
14.746
CRR073301
Leaf 2
17.940
CRR073302
Leaf 3
17.906
CRR073303
Juvenile bud 1
14.097
CRR073304
Juvenile bud 2
11.574
CRR073305
Juvenile bud 3
16.000
CRR073306
Third green 1
12.257
CRR073307
Third green 2
12.786
CRR073308
Third green 3
15.928
CRR073309
Second white 1
11.828
CRR073310
Second white 2
11.055
CRR073311
Second white 3
6.409
CRR073312
Silver flowering 1
4.419
CRR073313
Silver flowering 2
3.700
CRR073314
Silver flowering 3
4.229
CRR073315
Gold flowering 1
45.916
CRR073316
Gold flowering 2
49.210
CRR073317
Gold flowering 3
71.267
CRR073318
Tawny withering 1
16.434
CRR073319
Tawny withering 2
19.516
CRR073320
Tawny withering 3
14.512