Detail information of GWHGAAZE030317


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008375030.11.1975E-63PREDICTED: N-alpha-acetyltransferase 40-like isoform X3 [Malus domestica]
COGYP_004106176.10.0000002N-acetyltransferase GCN5
trEMBLtr|M5WN18|M5WN18_PRUPE9E-63Uncharacterized protein {ECO:0000313|EMBL:EMJ10678.1}
TAIR10AT1G18335.11E-36Acyl-CoA N-acyltransferases (NAT) superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4151151941512243+
GWHAAZE00000009mRNA4151151941512243+
GWHAAZE00000009exon4151151941511842+
GWHAAZE00000009exon4151216341512243+
GWHAAZE00000009CDS4151151941511842+
GWHAAZE00000009CDS4151216341512243+
Transcript Sequence

Network for GWHGAAZE030317

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00583.26Acetyltransf_1361303.30E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGNAT

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008080molecular_functionN-acetyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.475
SRR3591706second leaf3.302
SRR3591707mature leaf2.755
SRR3591708Shoot apex5.446
SRR3591709Stem6.635
SRR3591710White floral bud6.916
SRR3591711White flower6.520
SRR3591712Green floral bud6.194
SRR3591713Yellow flower5.816
SRP173429 SRR8316895Juvenile bud stage 1.881
SRR8316896Juvenile bud stage 4.127
SRR8316897Juvenile bud stage 2.414
SRR8316894Third green stage 2.032
SRR8316900Third green stage 5.330
SRR8316901Third green stage 5.373
SRR8316898Complete white stage 2.878
SRR8316899Complete white stage 7.348
SRR8316903Complete white stage 4.120
SRR8316902Silver flowering stage1.665
SRR8316904Silver flowering stage5.997
SRR8316905Silver flowering stage2.255
SRR8316906Gold flowering stage 2.552
SRR8316907Gold flowering stage 3.945
SRR8316908Gold flowering stage 7.074
SRP132670SRR6706286Control2.352
SRR6706287Light intensity 50%2.059
SRR6706288Light intensity 20%2.872
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.785
CNS0095593Slightly white alabastrum(diploid) 22.287
CNS0095594Slightly white alabastrum(diploid) 33.165
CNS0095595Whole white alabastrum(diploid) 22.771
CNS0095596Whole white alabastrum(diploid) 35.383
CNS0095597Whole white alabastrum(diploid) 43.712
CNS0095598Silvery flower (diploied) 17.587
CNS0095599Silvery flower (diploied) 26.935
CNS0095600Silvery flower (diploied) 36.790
CNS0095601Golden flower (diploid) 12.420
CNS0095602Golden flower (diploid) 25.980
CNS0095603Golden flower (diploid) 33.910
CNS0095604Slightly white alabastrum(tetraploid) 18.215
CNS0095605Slightly white alabastrum(tetraploid) 26.606
CNS0095606Slightly white alabastrum(tetraploid) 38.887
CNS0095607Whole white alabastrum(tetraploid) 14.026
CNS0095608Whole white alabastrum(tetraploid) 24.693
CNS0095609Whole white alabastrum(tetraploid) 39.609
CNS0095610Silvery flower (diploied) 110.774
CNS0095611Silvery flower (diploied) 211.293
CNS0095612Silvery flower (diploied) 39.200
CNS0095613Golden flower (tetraploid) 17.067
CNS0095614Golden flower (tetraploid) 28.089
CNS0095615Golden flower (tetraploid) 33.348
CRA001975CRR073297Stem 11.061
CRR073298Stem 20.638
CRR073299Stem 31.312
CRR073300Leaf 11.182
CRR073301Leaf 20.975
CRR073302Leaf 30.625
CRR073303Juvenile bud 10.912
CRR073304Juvenile bud 20.017
CRR073305Juvenile bud 31.153
CRR073306Third green 10.000
CRR073307Third green 20.071
CRR073308Third green 30.035
CRR073309Second white 10.287
CRR073310Second white 20.223
CRR073311Second white 30.028
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.650
CRR073316Gold flowering 20.288
CRR073317Gold flowering 30.871
CRR073318Tawny withering 11.117
CRR073319Tawny withering 21.575
CRR073320Tawny withering 30.369