Detail information of GWHGAAZE030360


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010663654.12.83627E-38PREDICTED: probable glutathione S-transferase [Vitis vinifera]
Swissprottr|P32110|GSTX6_SOYBN2E-16Probable glutathione S-transferase
trEMBLtr|F6GTT1|F6GTT1_VITVI1E-38Putative uncharacterized protein {ECO:0000313|EMBL:CCB43255.1}
TAIR10AT2G29460.12E-13glutathione S-transferase tau 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4224661442247332-
GWHAAZE00000009mRNA4224661442247332-
GWHAAZE00000009exon4224661442246886-
GWHAAZE00000009exon4224703542247150-
GWHAAZE00000009exon4224720642247332-
GWHAAZE00000009CDS4224720642247332-
GWHAAZE00000009CDS4224703542247150-
GWHAAZE00000009CDS4224661442246886-
Transcript Sequence

Network for GWHGAAZE030360

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf2.291
SRR3591707mature leaf1.603
SRR3591708Shoot apex0.441
SRR3591709Stem0.284
SRR3591710White floral bud1.781
SRR3591711White flower1.157
SRR3591712Green floral bud0.554
SRR3591713Yellow flower1.405
SRP173429 SRR8316895Juvenile bud stage 0.419
SRR8316896Juvenile bud stage 0.396
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.177
SRR8316900Third green stage 0.583
SRR8316901Third green stage 0.386
SRR8316898Complete white stage 0.854
SRR8316899Complete white stage 0.759
SRR8316903Complete white stage 1.124
SRR8316902Silver flowering stage0.927
SRR8316904Silver flowering stage0.794
SRR8316905Silver flowering stage0.401
SRR8316906Gold flowering stage 1.010
SRR8316907Gold flowering stage 1.239
SRR8316908Gold flowering stage 0.730
SRP132670SRR6706286Control0.000
SRR6706287Light intensity 50%0.266
SRR6706288Light intensity 20%0.401
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.007
CNS0095593Slightly white alabastrum(diploid) 20.407
CNS0095594Slightly white alabastrum(diploid) 30.528
CNS0095595Whole white alabastrum(diploid) 20.177
CNS0095596Whole white alabastrum(diploid) 30.454
CNS0095597Whole white alabastrum(diploid) 40.171
CNS0095598Silvery flower (diploied) 11.539
CNS0095599Silvery flower (diploied) 20.236
CNS0095600Silvery flower (diploied) 30.440
CNS0095601Golden flower (diploid) 11.087
CNS0095602Golden flower (diploid) 21.009
CNS0095603Golden flower (diploid) 30.348
CNS0095604Slightly white alabastrum(tetraploid) 10.055
CNS0095605Slightly white alabastrum(tetraploid) 20.425
CNS0095606Slightly white alabastrum(tetraploid) 30.045
CNS0095607Whole white alabastrum(tetraploid) 10.054
CNS0095608Whole white alabastrum(tetraploid) 20.420
CNS0095609Whole white alabastrum(tetraploid) 30.098
CNS0095610Silvery flower (diploied) 10.491
CNS0095611Silvery flower (diploied) 20.165
CNS0095612Silvery flower (diploied) 31.217
CNS0095613Golden flower (tetraploid) 10.279
CNS0095614Golden flower (tetraploid) 20.874
CNS0095615Golden flower (tetraploid) 30.820
CRA001975CRR073297Stem 10.067
CRR073298Stem 20.198
CRR073299Stem 30.000
CRR073300Leaf 10.292
CRR073301Leaf 20.084
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.415
CRR073307Third green 20.123
CRR073308Third green 30.344
CRR073309Second white 10.293
CRR073310Second white 20.795
CRR073311Second white 30.295
CRR073312Silver flowering 10.388
CRR073313Silver flowering 20.155
CRR073314Silver flowering 30.088
CRR073315Gold flowering 10.127
CRR073316Gold flowering 20.505
CRR073317Gold flowering 30.231
CRR073318Tawny withering 10.168
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.248