Gene detail

Detail information of GWHGAAZE030428

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_006345074.1	0	PREDICTED: enolase 1, chloroplastic-like [Solanum tuberosum]
COG	NP_247203.1	2E-143	phosphopyruvate hydratase
Swissprot	tr\|Q9C9C4\|ENO1_ARATH	0	Enolase 1, chloroplastic (Precursor)
trEMBL	tr\|M1C9X0\|M1C9X0_SOLTU	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400062986}
TAIR10	AT1G74030.1	0	enolase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	43464770	43468140	+
GWHAAZE00000009	mRNA	43464770	43468140	+
GWHAAZE00000009	exon	43464770	43465188	+
GWHAAZE00000009	exon	43466071	43466378	+
GWHAAZE00000009	exon	43466588	43466742	+
GWHAAZE00000009	exon	43466834	43467131	+
GWHAAZE00000009	exon	43467602	43467708	+
GWHAAZE00000009	exon	43467790	43467840	+
GWHAAZE00000009	exon	43468075	43468140	+
GWHAAZE00000009	CDS	43464770	43465188	+
GWHAAZE00000009	CDS	43466071	43466378	+
GWHAAZE00000009	CDS	43466588	43466742	+
GWHAAZE00000009	CDS	43466834	43467131	+
GWHAAZE00000009	CDS	43467602	43467708	+
GWHAAZE00000009	CDS	43467790	43467840	+
GWHAAZE00000009	CDS	43468075	43468140	+

Transcript Sequence
>GWHTAAZE030462 ATGGCTTTAGCTCCCACGTCACTCTCAAAACCCTTCTTCTCCACCAATCCAACTTCATCACGCTCACTCCCTCTCCCTCCACTTTCCACCTCACTTCCATCCCGCAAATCTCGTCCTTTCATCGTCCGGAGCTCCATCGCCGTTGCTTCCTCGACGACCACCTCAACAAAAGCATCGACTGTGAAATCGGTGAAGGCGAGGCAGATCATAGACAGCAGGGGAAATCCGACGGTCGAGGTTGATCTTGTCACCGATGATCTGTACCGATCTGCGGTCCCGAGTGGGGCCTCCACCGGGATCTACGAGGCATTGGAGCTAAGAGATGGTGATAAGAGTGTTTATGGAGGTAAAGGTGTACTCAATGCTGTCAACAACATCAATCATGTCTTAGGCCCCAAACTCATTGGTCTTGATGTCAGGAGTCAAGCTGATTTTGATGCAATTATGCTGGAGATAGATGGAACTCCAAATAAATCGAAACTGGGGGCTAATGCGATACTTGGAGTATCTCTAAGTGTATGTAGAGCTGGTGCAGGAGCAAAGGGAATTCCCCTGTACAAGCACATTCAGGAAATATCAGGAACAAAGGAGCTTGTTATGCCAGTTCCAGCATTCAATGTGATCAATGGAGGCAGCCATGCCGGAAATAACCTGGCCATGCAAGAATTCATGATACTACCAGTTGGAGCTTCCTCATTCGCTCAGGCACTTTGTATGGGCAGTGAAGTATACCACACACTGAAGGGAATTATCAAAGCAAAATATGGACAAGATGCATGTAATGTTGGAGATGAAGGAGGTTTTGCTCCCAATGTTCAAGATAATAGGGAAGGATTGGTGCTGCTTATTGATGCAATTGAAAAGGCTGGTTACACTGGCAAGATCAAAATCGGGATGGATGTTGCAGCTTCAGAGTTCTTAACAAAAGATGCAAAATATGATCTCAATTTTAAGAAACAACCAAATGATGGTGCTCACGTGCTCTCAGCTCAGTCTCTCTGTGATCTTTACAAGGAGTTCATCAAAGATTTCCCTATTGTGTCAATTGAAGATCCTTTTGACCAAGATGATTGGAGCTCATGGACTTCGCTGCAGTCTTCAGTTGATATCCAAATTGTTGGTGATGACTTGTTGGTCACAAATCCTACAAAAATCGCTGAAGCCATTGGGAAAAAGGCTTCTCTGGACTCAAAAGCAGTAGGATGGGGTGTGATGGTCAGCCACCGCAGCGGTGAAACAGAGGATAACTTCATTGCTGATCTCTCTGTTGGCTTGGCTAGTGGACAGATCAAAACAGGAGCTCCTTGCCGAAGTGAACGGTTGTCCAAATATAATCAGCTTTTGCGCATTGAAGAGGAACTTGGAGATGTTCGGTATGCAGGTGAAGCTTTCAGATCCCCATAA

Network for GWHGAAZE030428

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03952.17	Enolase_N	61	189	5.50E-55
PF00113.23	Enolase_C	198	393	1.10E-90

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01689	ENO, eno	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Biosynthesis of amino acids	map01230
		Glycolysis / Gluconeogenesis	map00010
		Methane metabolism	map00680
		RNA degradation	map03018
		HIF-1 signaling pathway	map04066

Gene Ontology

GO term	Ontology	Name
GO:0006096	biological_process	glycolytic process
GO:0000015	cellular_component	phosphopyruvate hydratase complex
GO:0000287	molecular_function	magnesium ion binding
GO:0004634	molecular_function	phosphopyruvate hydratase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	47.975
	SRR3591706	second leaf	73.697
	SRR3591707	mature leaf	18.627
	SRR3591708	Shoot apex	66.615
	SRR3591709	Stem	28.765
	SRR3591710	White floral bud	25.690
	SRR3591711	White flower	31.028
	SRR3591712	Green floral bud	54.695
	SRR3591713	Yellow flower	32.650
SRP173429	SRR8316895	Juvenile bud stage	33.760
	SRR8316896	Juvenile bud stage	45.231
	SRR8316897	Juvenile bud stage	19.644
	SRR8316894	Third green stage	20.609
	SRR8316900	Third green stage	98.435
	SRR8316901	Third green stage	89.599
	SRR8316898	Complete white stage	21.071
	SRR8316899	Complete white stage	62.025
	SRR8316903	Complete white stage	29.926
	SRR8316902	Silver flowering stage	41.426
	SRR8316904	Silver flowering stage	48.069
	SRR8316905	Silver flowering stage	32.093
	SRR8316906	Gold flowering stage	145.923
	SRR8316907	Gold flowering stage	129.107
	SRR8316908	Gold flowering stage	129.528
SRP132670	SRR6706286	Control	68.056
	SRR6706287	Light intensity 50%	78.984
	SRR6706288	Light intensity 20%	92.618
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	36.784
	CNS0095593	Slightly white alabastrum(diploid) 2	43.246
	CNS0095594	Slightly white alabastrum(diploid) 3	34.748
	CNS0095595	Whole white alabastrum(diploid) 2	43.738
	CNS0095596	Whole white alabastrum(diploid) 3	26.362
	CNS0095597	Whole white alabastrum(diploid) 4	28.131
	CNS0095598	Silvery flower (diploied) 1	27.353
	CNS0095599	Silvery flower (diploied) 2	28.930
	CNS0095600	Silvery flower (diploied) 3	56.275
	CNS0095601	Golden flower (diploid) 1	26.497
	CNS0095602	Golden flower (diploid) 2	44.864
	CNS0095603	Golden flower (diploid) 3	42.194
	CNS0095604	Slightly white alabastrum(tetraploid) 1	31.316
	CNS0095605	Slightly white alabastrum(tetraploid) 2	28.368
	CNS0095606	Slightly white alabastrum(tetraploid) 3	75.910
	CNS0095607	Whole white alabastrum(tetraploid) 1	16.026
	CNS0095608	Whole white alabastrum(tetraploid) 2	17.649
	CNS0095609	Whole white alabastrum(tetraploid) 3	62.161
	CNS0095610	Silvery flower (diploied) 1	59.688
	CNS0095611	Silvery flower (diploied) 2	56.608
	CNS0095612	Silvery flower (diploied) 3	57.340
	CNS0095613	Golden flower (tetraploid) 1	47.630
	CNS0095614	Golden flower (tetraploid) 2	85.387
	CNS0095615	Golden flower (tetraploid) 3	39.041
CRA001975	CRR073297	Stem 1	52.073
	CRR073298	Stem 2	50.979
	CRR073299	Stem 3	40.074
	CRR073300	Leaf 1	104.731
	CRR073301	Leaf 2	89.070
	CRR073302	Leaf 3	100.340
	CRR073303	Juvenile bud 1	78.149
	CRR073304	Juvenile bud 2	75.314
	CRR073305	Juvenile bud 3	64.971
	CRR073306	Third green 1	16.409
	CRR073307	Third green 2	8.695
	CRR073308	Third green 3	13.082
	CRR073309	Second white 1	59.397
	CRR073310	Second white 2	51.459
	CRR073311	Second white 3	52.878
	CRR073312	Silver flowering 1	55.911
	CRR073313	Silver flowering 2	59.859
	CRR073314	Silver flowering 3	61.838
	CRR073315	Gold flowering 1	7.910
	CRR073316	Gold flowering 2	12.208
	CRR073317	Gold flowering 3	7.856
	CRR073318	Tawny withering 1	52.406
	CRR073319	Tawny withering 2	46.437
	CRR073320	Tawny withering 3	58.147