Detail information of GWHGAAZE030710


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010663034.10PREDICTED: telomere length regulation protein TEL2 homolog isoform X1 [Vitis vinifera]
trEMBLtr|F6GSG3|F6GSG3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB42891.1}
TAIR10AT3G48470.10embryo defective 2423

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4750354047510471+
GWHAAZE00000009mRNA4750354047510471+
GWHAAZE00000009exon4750354047503714+
GWHAAZE00000009exon4750382447503852+
GWHAAZE00000009exon4750394047504042+
GWHAAZE00000009exon4750459647504770+
GWHAAZE00000009exon4750557747505762+
GWHAAZE00000009exon4750585147505887+
GWHAAZE00000009exon4750601547506180+
GWHAAZE00000009exon4750668047506956+
GWHAAZE00000009exon4750717947507393+
GWHAAZE00000009exon4750762147507740+
GWHAAZE00000009exon4750784147508349+
GWHAAZE00000009exon4750845847509224+
GWHAAZE00000009exon4750995747510155+
GWHAAZE00000009exon4751031047510471+
GWHAAZE00000009CDS4750354047503714+
GWHAAZE00000009CDS4750382447503852+
GWHAAZE00000009CDS4750394047504042+
GWHAAZE00000009CDS4750459647504770+
GWHAAZE00000009CDS4750557747505762+
GWHAAZE00000009CDS4750585147505887+
GWHAAZE00000009CDS4750601547506180+
GWHAAZE00000009CDS4750668047506956+
GWHAAZE00000009CDS4750717947507393+
GWHAAZE00000009CDS4750762147507740+
GWHAAZE00000009CDS4750784147508349+
GWHAAZE00000009CDS4750845847509224+
GWHAAZE00000009CDS4750995747510155+
GWHAAZE00000009CDS4751031047510471+
Transcript Sequence

Network for GWHGAAZE030710

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10193.10Telomere_reg-26487591.20E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11137TELO2, TEL2 Fanconi anemia pathway map03460
mTOR signaling pathwaymap04150

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.549
SRR3591706second leaf10.686
SRR3591707mature leaf13.148
SRR3591708Shoot apex20.341
SRR3591709Stem21.813
SRR3591710White floral bud19.346
SRR3591711White flower24.782
SRR3591712Green floral bud15.623
SRR3591713Yellow flower21.627
SRP173429 SRR8316895Juvenile bud stage 10.058
SRR8316896Juvenile bud stage 14.882
SRR8316897Juvenile bud stage 5.701
SRR8316894Third green stage 5.731
SRR8316900Third green stage 13.223
SRR8316901Third green stage 12.362
SRR8316898Complete white stage 5.533
SRR8316899Complete white stage 19.457
SRR8316903Complete white stage 9.641
SRR8316902Silver flowering stage6.979
SRR8316904Silver flowering stage9.926
SRR8316905Silver flowering stage4.182
SRR8316906Gold flowering stage 16.917
SRR8316907Gold flowering stage 17.077
SRR8316908Gold flowering stage 15.903
SRP132670SRR6706286Control8.546
SRR6706287Light intensity 50%8.543
SRR6706288Light intensity 20%9.178
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.427
CNS0095593Slightly white alabastrum(diploid) 29.281
CNS0095594Slightly white alabastrum(diploid) 39.821
CNS0095595Whole white alabastrum(diploid) 28.377
CNS0095596Whole white alabastrum(diploid) 37.148
CNS0095597Whole white alabastrum(diploid) 47.271
CNS0095598Silvery flower (diploied) 113.474
CNS0095599Silvery flower (diploied) 210.068
CNS0095600Silvery flower (diploied) 317.110
CNS0095601Golden flower (diploid) 111.191
CNS0095602Golden flower (diploid) 218.837
CNS0095603Golden flower (diploid) 315.927
CNS0095604Slightly white alabastrum(tetraploid) 110.227
CNS0095605Slightly white alabastrum(tetraploid) 210.084
CNS0095606Slightly white alabastrum(tetraploid) 316.350
CNS0095607Whole white alabastrum(tetraploid) 17.854
CNS0095608Whole white alabastrum(tetraploid) 25.241
CNS0095609Whole white alabastrum(tetraploid) 310.430
CNS0095610Silvery flower (diploied) 117.578
CNS0095611Silvery flower (diploied) 219.320
CNS0095612Silvery flower (diploied) 317.988
CNS0095613Golden flower (tetraploid) 110.627
CNS0095614Golden flower (tetraploid) 216.537
CNS0095615Golden flower (tetraploid) 315.469
CRA001975CRR073297Stem 113.844
CRR073298Stem 212.357
CRR073299Stem 39.169
CRR073300Leaf 112.660
CRR073301Leaf 210.608
CRR073302Leaf 38.169
CRR073303Juvenile bud 17.479
CRR073304Juvenile bud 24.220
CRR073305Juvenile bud 311.274
CRR073306Third green 11.845
CRR073307Third green 22.302
CRR073308Third green 32.672
CRR073309Second white 16.424
CRR073310Second white 27.945
CRR073311Second white 39.336
CRR073312Silver flowering 17.493
CRR073313Silver flowering 29.547
CRR073314Silver flowering 36.192
CRR073315Gold flowering 14.958
CRR073316Gold flowering 29.923
CRR073317Gold flowering 34.670
CRR073318Tawny withering 19.715
CRR073319Tawny withering 27.819
CRR073320Tawny withering 38.223