Gene detail

Detail information of GWHGAAZE030728

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009346508.1	2.55943E-84	PREDICTED: probable adenylate kinase 7, mitochondrial isoform X1 [Pyrus x bretschneideri]
COG	YP_003803250.1	8E-18	adenylate kinase
Swissprot	tr\|Q8L7W7\|KAD7_ARATH	7E-61	Probable adenylate kinase 7, mitochondrial (Precursor)
trEMBL	tr\|A0A067EKL2\|A0A067EKL2_CITSI	3E-79	Uncharacterized protein {ECO:0000313\|EMBL:KDO55623.1}
TAIR10	AT3G01820.1	4E-45	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	47709223	47712447	-
GWHAAZE00000009	mRNA	47709223	47712447	-
GWHAAZE00000009	exon	47709223	47709354	-
GWHAAZE00000009	exon	47709525	47709671	-
GWHAAZE00000009	exon	47711180	47711320	-
GWHAAZE00000009	exon	47712013	47712447	-
GWHAAZE00000009	CDS	47712013	47712447	-
GWHAAZE00000009	CDS	47711180	47711320	-
GWHAAZE00000009	CDS	47709525	47709671	-
GWHAAZE00000009	CDS	47709223	47709354	-

Transcript Sequence
>GWHTAAZE030762 ATGGCCGGACTCTACCACTTCAAACACCCCTCCGCCGCTCTCCACCAACTGAGAGCGGCCGTGCCACCTCTTCTCCTGATTCTCCAATCTTCTCTCACCCGGTCTTTTAGAACCTATACCACCGGTGGTGCCACGTTAGCTCAGCCGCAGCTAGACCCCGATTACTACCTTGACGAAGACACACATCAGAACCACCACGAATCCGCCCCTCACCGGCAGTTCTTTCCCGTGAATTTGGACACCGGTGGCTTAATACCACTGAGAGGAGTGCAGTGGATTATCATAGGCAGTTCCGGCGCAAAGAAGCACGTGTTCGCCGAGAAGCTCTCGAAGCTTCTAGAAGTTCCTCACATTTCCGTAGGCAGCCTAGTCGGTCAAGACCTTAGCCCTAGGTCCCTTCTCTACAAGCAAGTTATTTCTCTACTCCTTGCCTTGATTGCGGATGCAGTGAACCAAGGGATGCTTGTTCCAGAGGAGATAATTTTTGGTCTGTTGTCAAAGAGGCTGGAAGAAGGGCATAGCAGAGGTGAAACAGGGTTTATCCTTAACGGAATTCCTCGAACAAAAATCCAAGCTGAGATCCTTGACCAACTTGTTGATATTGATCTGGTTTTGAACTTTAAACGCGTGGAGGACTGCTCTTCAGAACACTCTTGGTTAAAATATTCCATGTCTAGTAAAAAAGGAACTTGGAACCGAAAAGCTCATGCCTATTCAAAGCAGATAAAGCAAGTGGAAGATTACTATGAGAAAAAAGAGAAGCTACTGGATATTCAAGTAGGGAGCACCCCTGGGGAGACTTGGCAAGGCCTCTTGGGTGCCTTAGGTCTCCACTCTCCACCAGTTCAAAGCTGA

Network for GWHGAAZE030728

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00406.23	ADK	94	253	1.70E-15

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00939	adk, AK	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Purine metabolism	map00230
		Thiamine metabolism	map00730

Gene Ontology

GO term	Ontology	Name
GO:0006139	biological_process	nucleobase-containing compound metabolic process
GO:0005524	molecular_function	ATP binding
GO:0019205	molecular_function	nucleobase-containing compound kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	8.488
	SRR3591706	second leaf	7.010
	SRR3591707	mature leaf	10.804
	SRR3591708	Shoot apex	12.499
	SRR3591709	Stem	9.042
	SRR3591710	White floral bud	16.963
	SRR3591711	White flower	18.188
	SRR3591712	Green floral bud	23.373
	SRR3591713	Yellow flower	13.446
SRP173429	SRR8316895	Juvenile bud stage	7.900
	SRR8316896	Juvenile bud stage	12.410
	SRR8316897	Juvenile bud stage	4.536
	SRR8316894	Third green stage	4.539
	SRR8316900	Third green stage	13.882
	SRR8316901	Third green stage	14.164
	SRR8316898	Complete white stage	6.837
	SRR8316899	Complete white stage	22.313
	SRR8316903	Complete white stage	9.520
	SRR8316902	Silver flowering stage	7.713
	SRR8316904	Silver flowering stage	9.007
	SRR8316905	Silver flowering stage	4.964
	SRR8316906	Gold flowering stage	12.295
	SRR8316907	Gold flowering stage	15.812
	SRR8316908	Gold flowering stage	10.376
SRP132670	SRR6706286	Control	12.133
	SRR6706287	Light intensity 50%	11.568
	SRR6706288	Light intensity 20%	13.449
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	9.165
	CNS0095593	Slightly white alabastrum(diploid) 2	9.324
	CNS0095594	Slightly white alabastrum(diploid) 3	6.518
	CNS0095595	Whole white alabastrum(diploid) 2	10.230
	CNS0095596	Whole white alabastrum(diploid) 3	7.332
	CNS0095597	Whole white alabastrum(diploid) 4	8.980
	CNS0095598	Silvery flower (diploied) 1	16.494
	CNS0095599	Silvery flower (diploied) 2	14.423
	CNS0095600	Silvery flower (diploied) 3	16.356
	CNS0095601	Golden flower (diploid) 1	14.333
	CNS0095602	Golden flower (diploid) 2	15.641
	CNS0095603	Golden flower (diploid) 3	12.466
	CNS0095604	Slightly white alabastrum(tetraploid) 1	10.835
	CNS0095605	Slightly white alabastrum(tetraploid) 2	7.898
	CNS0095606	Slightly white alabastrum(tetraploid) 3	14.735
	CNS0095607	Whole white alabastrum(tetraploid) 1	7.984
	CNS0095608	Whole white alabastrum(tetraploid) 2	7.065
	CNS0095609	Whole white alabastrum(tetraploid) 3	11.577
	CNS0095610	Silvery flower (diploied) 1	21.919
	CNS0095611	Silvery flower (diploied) 2	23.383
	CNS0095612	Silvery flower (diploied) 3	28.334
	CNS0095613	Golden flower (tetraploid) 1	12.746
	CNS0095614	Golden flower (tetraploid) 2	20.824
	CNS0095615	Golden flower (tetraploid) 3	6.454
CRA001975	CRR073297	Stem 1	10.865
	CRR073298	Stem 2	9.951
	CRR073299	Stem 3	9.877
	CRR073300	Leaf 1	7.515
	CRR073301	Leaf 2	8.266
	CRR073302	Leaf 3	4.994
	CRR073303	Juvenile bud 1	7.905
	CRR073304	Juvenile bud 2	4.759
	CRR073305	Juvenile bud 3	7.195
	CRR073306	Third green 1	1.131
	CRR073307	Third green 2	0.790
	CRR073308	Third green 3	1.232
	CRR073309	Second white 1	3.953
	CRR073310	Second white 2	2.188
	CRR073311	Second white 3	2.337
	CRR073312	Silver flowering 1	0.847
	CRR073313	Silver flowering 2	0.346
	CRR073314	Silver flowering 3	0.820
	CRR073315	Gold flowering 1	22.679
	CRR073316	Gold flowering 2	30.980
	CRR073317	Gold flowering 3	17.159
	CRR073318	Tawny withering 1	8.456
	CRR073319	Tawny withering 2	5.331
	CRR073320	Tawny withering 3	7.183