Detail information of GWHGAAZE030862


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011082208.14.77161E-66PREDICTED: zinc finger protein 1-like [Sesamum indicum]
Swissprottr|Q42485|ZFP1_ARATH1E-37Zinc finger protein 1
trEMBLtr|A5BQW1|A5BQW1_VITVI2E-64Putative uncharacterized protein {ECO:0000313|EMBL:CAN74885.1}
TAIR10AT1G80730.12E-28zinc-finger protein 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4953794549538592+
GWHAAZE00000009mRNA4953794549538592+
GWHAAZE00000009exon4953794549538592+
GWHAAZE00000009CDS4953794549538592+
Transcript Sequence

Network for GWHGAAZE030862

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.145
SRR3591706second leaf1.507
SRR3591707mature leaf1.476
SRR3591708Shoot apex1.414
SRR3591709Stem6.408
SRR3591710White floral bud0.288
SRR3591711White flower0.015
SRR3591712Green floral bud0.665
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.710
SRR8316896Juvenile bud stage 0.822
SRR8316897Juvenile bud stage 0.487
SRR8316894Third green stage 0.408
SRR8316900Third green stage 0.044
SRR8316901Third green stage 0.468
SRR8316898Complete white stage 0.125
SRR8316899Complete white stage 0.278
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.039
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.100
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.156
SRP132670SRR6706286Control0.000
SRR6706287Light intensity 50%0.179
SRR6706288Light intensity 20%0.148
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.110
CNS0095593Slightly white alabastrum(diploid) 20.041
CNS0095594Slightly white alabastrum(diploid) 30.508
CNS0095595Whole white alabastrum(diploid) 20.261
CNS0095596Whole white alabastrum(diploid) 30.711
CNS0095597Whole white alabastrum(diploid) 40.182
CNS0095598Silvery flower (diploied) 10.321
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.050
CNS0095601Golden flower (diploid) 10.554
CNS0095602Golden flower (diploid) 20.602
CNS0095603Golden flower (diploid) 30.119
CNS0095604Slightly white alabastrum(tetraploid) 10.445
CNS0095605Slightly white alabastrum(tetraploid) 20.348
CNS0095606Slightly white alabastrum(tetraploid) 30.560
CNS0095607Whole white alabastrum(tetraploid) 10.226
CNS0095608Whole white alabastrum(tetraploid) 20.461
CNS0095609Whole white alabastrum(tetraploid) 30.505
CNS0095610Silvery flower (diploied) 10.000
CNS0095611Silvery flower (diploied) 20.237
CNS0095612Silvery flower (diploied) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.080
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 11.865
CRR073298Stem 20.988
CRR073299Stem 31.423
CRR073300Leaf 10.000
CRR073301Leaf 20.055
CRR073302Leaf 30.604
CRR073303Juvenile bud 10.021
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.079
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.563
CRR073318Tawny withering 11.139
CRR073319Tawny withering 20.521
CRR073320Tawny withering 32.898