Detail information of GWHGAAZE031158


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010278038.17.1083E-83PREDICTED: trihelix transcription factor ASIL2-like isoform X2 [Nelumbo nucifera]
Swissprottr|Q9LJG8|ASIL2_ARATH4E-11Trihelix transcription factor ASIL2 {ECO:0000305}
trEMBLtr|M0SLF6|M0SLF6_MUSAM2E-66Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P05890_001}
TAIR10AT3G54390.19E-27sequence-specific DNA binding transcription factors

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5409322154094213-
GWHAAZE00000009mRNA5409322154094213-
GWHAAZE00000009exon5409322154094213-
GWHAAZE00000009CDS5409322154094213-
Transcript Sequence

Network for GWHGAAZE031158

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.7Myb_DNA-bind_4241151.10E-18
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.091
SRR3591706second leaf1.320
SRR3591707mature leaf6.280
SRR3591708Shoot apex1.904
SRR3591709Stem12.247
SRR3591710White floral bud9.157
SRR3591711White flower5.057
SRR3591712Green floral bud6.183
SRR3591713Yellow flower0.479
SRP173429 SRR8316895Juvenile bud stage 3.803
SRR8316896Juvenile bud stage 3.837
SRR8316897Juvenile bud stage 0.950
SRR8316894Third green stage 2.488
SRR8316900Third green stage 10.324
SRR8316901Third green stage 8.538
SRR8316898Complete white stage 2.544
SRR8316899Complete white stage 21.369
SRR8316903Complete white stage 4.012
SRR8316902Silver flowering stage1.432
SRR8316904Silver flowering stage0.914
SRR8316905Silver flowering stage0.551
SRR8316906Gold flowering stage 0.693
SRR8316907Gold flowering stage 0.698
SRR8316908Gold flowering stage 1.137
SRP132670SRR6706286Control12.511
SRR6706287Light intensity 50%11.899
SRR6706288Light intensity 20%11.870
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.941
CNS0095593Slightly white alabastrum(diploid) 214.037
CNS0095594Slightly white alabastrum(diploid) 37.572
CNS0095595Whole white alabastrum(diploid) 211.345
CNS0095596Whole white alabastrum(diploid) 37.550
CNS0095597Whole white alabastrum(diploid) 410.867
CNS0095598Silvery flower (diploied) 17.221
CNS0095599Silvery flower (diploied) 22.613
CNS0095600Silvery flower (diploied) 34.091
CNS0095601Golden flower (diploid) 13.378
CNS0095602Golden flower (diploid) 23.034
CNS0095603Golden flower (diploid) 33.731
CNS0095604Slightly white alabastrum(tetraploid) 17.697
CNS0095605Slightly white alabastrum(tetraploid) 210.374
CNS0095606Slightly white alabastrum(tetraploid) 313.682
CNS0095607Whole white alabastrum(tetraploid) 18.102
CNS0095608Whole white alabastrum(tetraploid) 27.644
CNS0095609Whole white alabastrum(tetraploid) 34.829
CNS0095610Silvery flower (diploied) 14.354
CNS0095611Silvery flower (diploied) 24.223
CNS0095612Silvery flower (diploied) 32.055
CNS0095613Golden flower (tetraploid) 10.962
CNS0095614Golden flower (tetraploid) 22.024
CNS0095615Golden flower (tetraploid) 30.658
CRA001975CRR073297Stem 14.672
CRR073298Stem 24.357
CRR073299Stem 35.701
CRR073300Leaf 17.258
CRR073301Leaf 27.960
CRR073302Leaf 37.096
CRR073303Juvenile bud 17.953
CRR073304Juvenile bud 22.920
CRR073305Juvenile bud 316.234
CRR073306Third green 11.617
CRR073307Third green 21.076
CRR073308Third green 31.024
CRR073309Second white 10.298
CRR073310Second white 20.678
CRR073311Second white 30.113
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.906
CRR073316Gold flowering 22.434
CRR073317Gold flowering 32.571
CRR073318Tawny withering 18.354
CRR073319Tawny withering 24.834
CRR073320Tawny withering 311.140