Detail information of GWHGAAZE031162


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009594203.10PREDICTED: calcium-transporting ATPase 9, plasma membrane-type [Nicotiana tomentosiformis]
COGYP_501831.11E-138calcium-translocating P-type ATPase, PMCA-type
Swissprottr|Q9LU41|ACA9_ARATH0Calcium-transporting ATPase 9, plasma membrane-type
trEMBLtr|A0A022PY01|A0A022PY01_ERYGU0Calcium-transporting ATPase {ECO:0000256|RuleBase:RU361146}
TAIR10AT3G21180.10autoinhibited Ca(2+)-ATPase 9

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5411298954131462-
GWHAAZE00000009mRNA5411298954131462-
GWHAAZE00000009exon5411298954113094-
GWHAAZE00000009exon5411323154113322-
GWHAAZE00000009exon5411344754113554-
GWHAAZE00000009exon5411379154113925-
GWHAAZE00000009exon5411405454114099-
GWHAAZE00000009exon5411462154114721-
GWHAAZE00000009exon5411522154115400-
GWHAAZE00000009exon5411968554119783-
GWHAAZE00000009exon5412048454120600-
GWHAAZE00000009exon5412072854120892-
GWHAAZE00000009exon5412099554121054-
GWHAAZE00000009exon5412140854121575-
GWHAAZE00000009exon5412171254121822-
GWHAAZE00000009exon5412285754122955-
GWHAAZE00000009exon5412304554123110-
GWHAAZE00000009exon5412357654123713-
GWHAAZE00000009exon5412379654123951-
GWHAAZE00000009exon5412418954124248-
GWHAAZE00000009exon5412431954124427-
GWHAAZE00000009exon5412451354124595-
GWHAAZE00000009exon5412467754124760-
GWHAAZE00000009exon5412575254125829-
GWHAAZE00000009exon5412591854126001-
GWHAAZE00000009exon5412610754126177-
GWHAAZE00000009exon5412712054127189-
GWHAAZE00000009exon5412862254128711-
GWHAAZE00000009exon5412880754128967-
GWHAAZE00000009exon5412902454129143-
GWHAAZE00000009exon5412932054129359-
GWHAAZE00000009exon5412943754129553-
GWHAAZE00000009exon5413128054131462-
GWHAAZE00000009CDS5413128054131462-
GWHAAZE00000009CDS5412943754129553-
GWHAAZE00000009CDS5412932054129359-
GWHAAZE00000009CDS5412902454129143-
GWHAAZE00000009CDS5412880754128967-
GWHAAZE00000009CDS5412862254128711-
GWHAAZE00000009CDS5412712054127189-
GWHAAZE00000009CDS5412610754126177-
GWHAAZE00000009CDS5412591854126001-
GWHAAZE00000009CDS5412575254125829-
GWHAAZE00000009CDS5412467754124760-
GWHAAZE00000009CDS5412451354124595-
GWHAAZE00000009CDS5412431954124427-
GWHAAZE00000009CDS5412418954124248-
GWHAAZE00000009CDS5412379654123951-
GWHAAZE00000009CDS5412357654123713-
GWHAAZE00000009CDS5412304554123110-
GWHAAZE00000009CDS5412285754122955-
GWHAAZE00000009CDS5412171254121822-
GWHAAZE00000009CDS5412140854121575-
GWHAAZE00000009CDS5412099554121054-
GWHAAZE00000009CDS5412072854120892-
GWHAAZE00000009CDS5412048454120600-
GWHAAZE00000009CDS5411968554119783-
GWHAAZE00000009CDS5411522154115400-
GWHAAZE00000009CDS5411462154114721-
GWHAAZE00000009CDS5411405454114099-
GWHAAZE00000009CDS5411379154113925-
GWHAAZE00000009CDS5411344754113554-
GWHAAZE00000009CDS5411323154113322-
GWHAAZE00000009CDS5411298954113094-
Transcript Sequence

Network for GWHGAAZE031162

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12515.9CaATP_NAI42846.20E-15
PF00690.27Cation_ATPase_N1632299.70E-11
PF00122.21E1-E2_ATPase2823397.00E-14
PF00122.21E1-E2_ATPase3384521.10E-10
PF00702.27Hydrolase4658121.30E-14
PF00689.22Cation_ATPase_C90210732.50E-43
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0070588biological_processcalcium ion transmembrane transport
GO:0016021cellular_componentintegral component of membrane
GO:0016020cellular_componentmembrane
GO:0005388molecular_functioncalcium transmembrane transporter activity, phosphorylative mechanism
GO:0005524molecular_functionATP binding
GO:0000166molecular_functionnucleotide binding
GO:0005516molecular_functioncalmodulin binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.075
SRR3591707mature leaf0.028
SRR3591708Shoot apex0.117
SRR3591709Stem0.349
SRR3591710White floral bud54.862
SRR3591711White flower3.741
SRR3591712Green floral bud46.693
SRR3591713Yellow flower2.748
SRP173429 SRR8316895Juvenile bud stage 10.683
SRR8316896Juvenile bud stage 22.610
SRR8316897Juvenile bud stage 10.224
SRR8316894Third green stage 11.327
SRR8316900Third green stage 40.504
SRR8316901Third green stage 37.844
SRR8316898Complete white stage 2.116
SRR8316899Complete white stage 6.750
SRR8316903Complete white stage 4.174
SRR8316902Silver flowering stage1.533
SRR8316904Silver flowering stage4.739
SRR8316905Silver flowering stage1.266
SRR8316906Gold flowering stage 3.378
SRR8316907Gold flowering stage 3.904
SRR8316908Gold flowering stage 1.545
SRP132670SRR6706286Control16.987
SRR6706287Light intensity 50%20.743
SRR6706288Light intensity 20%20.714
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.716
CNS0095593Slightly white alabastrum(diploid) 219.314
CNS0095594Slightly white alabastrum(diploid) 322.139
CNS0095595Whole white alabastrum(diploid) 244.752
CNS0095596Whole white alabastrum(diploid) 349.715
CNS0095597Whole white alabastrum(diploid) 454.190
CNS0095598Silvery flower (diploied) 17.049
CNS0095599Silvery flower (diploied) 212.467
CNS0095600Silvery flower (diploied) 35.791
CNS0095601Golden flower (diploid) 16.973
CNS0095602Golden flower (diploid) 25.739
CNS0095603Golden flower (diploid) 36.174
CNS0095604Slightly white alabastrum(tetraploid) 143.919
CNS0095605Slightly white alabastrum(tetraploid) 239.813
CNS0095606Slightly white alabastrum(tetraploid) 30.533
CNS0095607Whole white alabastrum(tetraploid) 180.537
CNS0095608Whole white alabastrum(tetraploid) 297.332
CNS0095609Whole white alabastrum(tetraploid) 355.893
CNS0095610Silvery flower (diploied) 11.435
CNS0095611Silvery flower (diploied) 26.236
CNS0095612Silvery flower (diploied) 314.553
CNS0095613Golden flower (tetraploid) 11.262
CNS0095614Golden flower (tetraploid) 20.454
CNS0095615Golden flower (tetraploid) 36.914
CRA001975CRR073297Stem 115.685
CRR073298Stem 213.387
CRR073299Stem 38.160
CRR073300Leaf 134.433
CRR073301Leaf 223.086
CRR073302Leaf 315.514
CRR073303Juvenile bud 123.230
CRR073304Juvenile bud 218.967
CRR073305Juvenile bud 38.284
CRR073306Third green 19.809
CRR073307Third green 29.664
CRR073308Third green 310.039
CRR073309Second white 11.115
CRR073310Second white 23.840
CRR073311Second white 33.703
CRR073312Silver flowering 112.852
CRR073313Silver flowering 213.512
CRR073314Silver flowering 36.002
CRR073315Gold flowering 111.596
CRR073316Gold flowering 26.597
CRR073317Gold flowering 34.876
CRR073318Tawny withering 111.352
CRR073319Tawny withering 212.084
CRR073320Tawny withering 312.198