Detail information of GWHGAAZE032812


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000050gene3333933719+
GWHAAZE00000050mRNA3333933719+
GWHAAZE00000050exon3333933719+
GWHAAZE00000050CDS3333933719+
Transcript Sequence

Network for GWHGAAZE032812

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040GO:0008097 5S rRNA binding GOslim:molecular_function
map03040 Spliceosome
GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity GOslim:molecular_function
CFinderModule0253Protein Kinases RLK-Pelle_CrRLK1L-1 family Protein Kinases RLK-Pelle_CrRLK1L-1


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.058
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 4.819
SRR8316896Juvenile bud stage 7.456
SRR8316897Juvenile bud stage 4.538
SRR8316894Third green stage 4.259
SRR8316900Third green stage 5.188
SRR8316901Third green stage 4.743
SRR8316898Complete white stage 1.229
SRR8316899Complete white stage 5.380
SRR8316903Complete white stage 2.665
SRR8316902Silver flowering stage2.124
SRR8316904Silver flowering stage2.195
SRR8316905Silver flowering stage1.079
SRR8316906Gold flowering stage 5.827
SRR8316907Gold flowering stage 7.423
SRR8316908Gold flowering stage 5.460
SRP132670SRR6706286Control7.648
SRR6706287Light intensity 50%7.485
SRR6706288Light intensity 20%9.708
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.377
CNS0095593Slightly white alabastrum(diploid) 22.119
CNS0095594Slightly white alabastrum(diploid) 31.522
CNS0095595Whole white alabastrum(diploid) 21.564
CNS0095596Whole white alabastrum(diploid) 30.662
CNS0095597Whole white alabastrum(diploid) 41.868
CNS0095598Silvery flower (diploied) 14.730
CNS0095599Silvery flower (diploied) 22.732
CNS0095600Silvery flower (diploied) 32.948
CNS0095601Golden flower (diploid) 15.131
CNS0095602Golden flower (diploid) 22.069
CNS0095603Golden flower (diploid) 32.151
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (diploied) 10.016
CNS0095611Silvery flower (diploied) 20.000
CNS0095612Silvery flower (diploied) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 14.890
CRR073298Stem 24.143
CRR073299Stem 30.136
CRR073300Leaf 15.520
CRR073301Leaf 23.515
CRR073302Leaf 32.469
CRR073303Juvenile bud 10.835
CRR073304Juvenile bud 22.288
CRR073305Juvenile bud 31.393
CRR073306Third green 10.075
CRR073307Third green 20.000
CRR073308Third green 30.086
CRR073309Second white 10.000
CRR073310Second white 21.032
CRR073311Second white 30.220
CRR073312Silver flowering 10.007
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.634
CRR073315Gold flowering 10.836
CRR073316Gold flowering 21.288
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.411
CRR073319Tawny withering 20.247
CRR073320Tawny withering 30.041