Detail information of GWHGAAZE032817


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKCW51315.15.28272E-44hypothetical protein EUGRSUZ_J00871 [Eucalyptus grandis]
Swissprottr|Q9SR05|ANX1_ARATH5E-25Receptor-like protein kinase ANXUR1 (Precursor)
trEMBLtr|A0A059AD51|A0A059AD51_EUCGR2E-44Uncharacterized protein {ECO:0000313|EMBL:KCW51315.1}
TAIR10AT3G04690.12E-18Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000050gene5783659005+
GWHAAZE00000050mRNA5783659005+
GWHAAZE00000050exon5783658196+
GWHAAZE00000050exon5841058448+
GWHAAZE00000050exon5852258608+
GWHAAZE00000050exon5869259005+
GWHAAZE00000050CDS5783658196+
GWHAAZE00000050CDS5841058448+
GWHAAZE00000050CDS5852258608+
GWHAAZE00000050CDS5869259005+
Transcript Sequence

Network for GWHGAAZE032817

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0253Protein Kinases RLK-Pelle_CrRLK1L-1 family Protein Kinases RLK-Pelle_CrRLK1L-1


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.483
SRR8316896Juvenile bud stage 2.256
SRR8316897Juvenile bud stage 1.319
SRR8316894Third green stage 1.123
SRR8316900Third green stage 1.982
SRR8316901Third green stage 1.839
SRR8316898Complete white stage 0.878
SRR8316899Complete white stage 2.453
SRR8316903Complete white stage 1.443
SRR8316902Silver flowering stage0.802
SRR8316904Silver flowering stage1.329
SRR8316905Silver flowering stage0.723
SRR8316906Gold flowering stage 2.556
SRR8316907Gold flowering stage 1.455
SRR8316908Gold flowering stage 1.421
SRP132670SRR6706286Control4.839
SRR6706287Light intensity 50%4.465
SRR6706288Light intensity 20%4.095
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.513
CNS0095593Slightly white alabastrum(diploid) 20.319
CNS0095594Slightly white alabastrum(diploid) 30.188
CNS0095595Whole white alabastrum(diploid) 20.861
CNS0095596Whole white alabastrum(diploid) 30.096
CNS0095597Whole white alabastrum(diploid) 40.237
CNS0095598Silvery flower (diploied) 11.932
CNS0095599Silvery flower (diploied) 21.125
CNS0095600Silvery flower (diploied) 30.970
CNS0095601Golden flower (diploid) 11.881
CNS0095602Golden flower (diploid) 21.230
CNS0095603Golden flower (diploid) 31.231
CNS0095604Slightly white alabastrum(tetraploid) 10.024
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.133
CNS0095607Whole white alabastrum(tetraploid) 10.041
CNS0095608Whole white alabastrum(tetraploid) 20.014
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (diploied) 10.075
CNS0095611Silvery flower (diploied) 20.000
CNS0095612Silvery flower (diploied) 30.011
CNS0095613Golden flower (tetraploid) 10.047
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.017
CRA001975CRR073297Stem 10.946
CRR073298Stem 21.161
CRR073299Stem 30.232
CRR073300Leaf 10.686
CRR073301Leaf 20.871
CRR073302Leaf 30.246
CRR073303Juvenile bud 10.205
CRR073304Juvenile bud 20.030
CRR073305Juvenile bud 30.423
CRR073306Third green 10.065
CRR073307Third green 20.030
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.025
CRR073311Second white 30.040
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.025
CRR073316Gold flowering 20.229
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.145
CRR073319Tawny withering 20.363
CRR073320Tawny withering 30.125