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Detail information of GWHGAAZE033213
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
CBI34985.3
2.49394E-77
unnamed protein product [Vitis vinifera]
COG
YP_006179981.1
2E-26
M10 family peptidase
Swissprot
tr|P29136|MEP1_SOYBN
5E-37
Metalloendoproteinase 1 (Precursor)
trEMBL
tr|A0A022R3Z5|A0A022R3Z5_ERYGU
1E-68
Uncharacterized protein {ECO:0000313|EMBL:EYU34694.1} (Fragment)
TAIR10
AT1G70170.1
4E-22
matrix metalloproteinase
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000094
gene
3010003
3010925
-
GWHAAZE00000094
mRNA
3010003
3010925
-
GWHAAZE00000094
exon
3010572
3010925
-
GWHAAZE00000094
exon
3010003
3010338
-
GWHAAZE00000094
CDS
3010572
3010925
-
GWHAAZE00000094
CDS
3010003
3010338
-
Transcript Sequence
>GWHTAAZE033252 ATGGCAATTAAAGTTTCCCATCTCTTTTTATGCATCTTCCTCCTTCTCCCTCTCCTGTCTAATTCAAAGTTAGAGGAGAACAATGGTGAAAAGCCATCATCGCCCTTTGAGTTTCTCAAGCATTTGCAAGGGTGCCACAAGGGAGACAAGCTAAAAGGTGTCCATAACCTTAAACAATACCTCAAGAATTTTGGTTACCTAAACTATCCCAAAAATTACTCCCATTGCGACGATGACGATTTTGATGATTTCTTAGAGGAAGCCGTCAAAACCTACCAACTCAATTATCATCTTAATGCCACGGGTACCTTAGATGCTCAAACAAGATCAAAGATGATTACACCTCGATGCGGTACCGAAGATTATTTGAATGCCGATATAAAGATTAGTTTCCATAGTGGTAGCCACGGAGATGGTCAGCCATTTGATGGTCGTGGTGGAACACTGGCTCATGCTTGGGCACCAACCGATGGAAGGTTTCACTATGATGCCGATGAATTGTGGTCTATTGGTCCAGTCTCCGGAGCTTATGATTTAGAGACTGTTGCGTTGCATGAAATTGGGCACCTTCTTGGACTTGGGCATAGCTCGGTTGAGGATGCAATCATGTATCCATCCATTATGGCGGGAACGACTAAAGGTCTACACGGGGATGACGTTCAGGGAATTAGGGTTTTGTATAACGTTTGA
Network for GWHGAAZE033213
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
CFinderModule0165
GO:0031012 extracellular matrix GOslim:cellular_component
GO:0008237 metallopeptidase activity GOslim:molecular_function
GO:0004222 metalloendopeptidase activity GOslim:molecular_function
GO:0006508 proteolysis GOslim:biological_process
GO:0008270 zinc ion binding GOslim:molecular_function
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF01471.19
PG_binding_1
53
112
3.30E-13
PF00413.25
Peptidase_M10
122
227
9.80E-37
Protein Sequence
>GWHPAAZE033234 MAIKVSHLFLCIFLLLPLLSNSKLEENNGEKPSSPFEFLKHLQGCHKGDKLKGVHNLKQYLKNFGYLNYPKNYSHCDDDDFDDFLEEAVKTYQLNYHLNATGTLDAQTRSKMITPRCGTEDYLNADIKISFHSGSHGDGQPFDGRGGTLAHAWAPTDGRFHYDADELWSIGPVSGAYDLETVALHEIGHLLGLGHSSVEDAIMYPSIMAGTTKGLHGDDVQGIRVLYNV
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
GO:0006508
biological_process
proteolysis
GO:0031012
cellular_component
extracellular matrix
GO:0008237
molecular_function
metallopeptidase activity
GO:0008270
molecular_function
zinc ion binding
GO:0004222
molecular_function
metalloendopeptidase activity
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
0.000
SRR3591706
second leaf
0.177
SRR3591707
mature leaf
2.136
SRR3591708
Shoot apex
0.188
SRR3591709
Stem
0.197
SRR3591710
White floral bud
1.943
SRR3591711
White flower
0.506
SRR3591712
Green floral bud
1.726
SRR3591713
Yellow flower
0.638
SRP173429
SRR8316895
Juvenile bud stage
0.197
SRR8316896
Juvenile bud stage
0.620
SRR8316897
Juvenile bud stage
0.192
SRR8316894
Third green stage
0.193
SRR8316900
Third green stage
0.736
SRR8316901
Third green stage
0.828
SRR8316898
Complete white stage
1.969
SRR8316899
Complete white stage
2.363
SRR8316903
Complete white stage
0.471
SRR8316902
Silver flowering stage
0.421
SRR8316904
Silver flowering stage
0.579
SRR8316905
Silver flowering stage
0.308
SRR8316906
Gold flowering stage
2.356
SRR8316907
Gold flowering stage
0.642
SRR8316908
Gold flowering stage
1.437
SRP132670
SRR6706286
Control
2.474
SRR6706287
Light intensity 50%
2.011
SRR6706288
Light intensity 20%
1.142
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
0.222
CNS0095593
Slightly white alabastrum(diploid) 2
0.110
CNS0095594
Slightly white alabastrum(diploid) 3
0.383
CNS0095595
Whole white alabastrum(diploid) 2
0.141
CNS0095596
Whole white alabastrum(diploid) 3
0.000
CNS0095597
Whole white alabastrum(diploid) 4
0.000
CNS0095598
Silvery flower (diploied) 1
0.266
CNS0095599
Silvery flower (diploied) 2
0.280
CNS0095600
Silvery flower (diploied) 3
0.764
CNS0095601
Golden flower (diploid) 1
0.421
CNS0095602
Golden flower (diploid) 2
0.265
CNS0095603
Golden flower (diploid) 3
0.443
CNS0095604
Slightly white alabastrum(tetraploid) 1
0.090
CNS0095605
Slightly white alabastrum(tetraploid) 2
0.124
CNS0095606
Slightly white alabastrum(tetraploid) 3
0.129
CNS0095607
Whole white alabastrum(tetraploid) 1
0.032
CNS0095608
Whole white alabastrum(tetraploid) 2
0.000
CNS0095609
Whole white alabastrum(tetraploid) 3
0.000
CNS0095610
Silvery flower (diploied) 1
0.320
CNS0095611
Silvery flower (diploied) 2
0.000
CNS0095612
Silvery flower (diploied) 3
0.177
CNS0095613
Golden flower (tetraploid) 1
0.632
CNS0095614
Golden flower (tetraploid) 2
1.942
CNS0095615
Golden flower (tetraploid) 3
0.000
CRA001975
CRR073297
Stem 1
0.054
CRR073298
Stem 2
0.139
CRR073299
Stem 3
0.000
CRR073300
Leaf 1
0.039
CRR073301
Leaf 2
0.105
CRR073302
Leaf 3
0.000
CRR073303
Juvenile bud 1
0.000
CRR073304
Juvenile bud 2
0.046
CRR073305
Juvenile bud 3
0.093
CRR073306
Third green 1
0.080
CRR073307
Third green 2
0.000
CRR073308
Third green 3
0.000
CRR073309
Second white 1
0.209
CRR073310
Second white 2
0.253
CRR073311
Second white 3
0.000
CRR073312
Silver flowering 1
0.000
CRR073313
Silver flowering 2
0.283
CRR073314
Silver flowering 3
0.000
CRR073315
Gold flowering 1
0.000
CRR073316
Gold flowering 2
0.118
CRR073317
Gold flowering 3
0.125
CRR073318
Tawny withering 1
1.525
CRR073319
Tawny withering 2
3.420
CRR073320
Tawny withering 3
0.125