Gene detail

Detail information of GWHGAAZE033342

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002263142.1	4.5389E-100	PREDICTED: probable adenylate kinase 7, mitochondrial [Vitis vinifera]
COG	YP_002428601.1	3E-16	adenylate kinase
Swissprot	tr\|Q6ZJ48\|KAD7_ORYSJ	2E-67	Probable adenylate kinase 7, mitochondrial (Precursor)
trEMBL	tr\|D7UBE1\|D7UBE1_VITVI	2E-100	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI40056.3}
TAIR10	AT3G01820.1	5E-45	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000094	gene	5116398	5118504	-
GWHAAZE00000094	mRNA	5116398	5118504	-
GWHAAZE00000094	exon	5116398	5116550	-
GWHAAZE00000094	exon	5116680	5116916	-
GWHAAZE00000094	exon	5117408	5117548	-
GWHAAZE00000094	exon	5118229	5118504	-
GWHAAZE00000094	CDS	5118229	5118504	-
GWHAAZE00000094	CDS	5117408	5117548	-
GWHAAZE00000094	CDS	5116680	5116916	-
GWHAAZE00000094	CDS	5116398	5116550	-

Transcript Sequence
>GWHTAAZE033381 ATGGCCGTATTGAGTAACCTGAGACTGGCAGCGCCAGCTCTATCGAGAAGATTTCTAGGGTTTCTCGCGAATAATCGAGCTTATGGATCAGCAGCTCTTCAATTGGACTACGATTACTATGATTATGTAGAAGAAGAAGAGCGGGAAATTAACCGGAACCGGACGATGGAGGACTCCGAGGGATCGATTTCGGGTAGGGGAGTGCAGTGGGTGATCATTGGAGATCCCATGGCTAATAGGCATGTTTATGCAGATAGGCTCTCGAAGCTTCTACAAATCGCCTCTGCTGTGAACCAAGGGAAGCTTGTACCAGAGGAAGTGATTTTTGGTCTGTTGTCAAAGAGGCTTGAAGAAGGATACTCCAAGGGCGAGACTGGTTTCATCTTGGATGGGATTCCTCGAACAAGGATCCAAGCTGAGATCCTTGAACAAATCGTTGATATAGATTTAGTCTTAAATTTCAAATGCACGGAATGCTTGCTGAAAAAACATTTAGGAAATCAAACTTGTTCTACTTGCGAAGATCTTCTTAAAATGGGAAGCCCCAAGTTAAGCCTAAATCTGCCGTCTAAAGATAATCAGATGGAACACACTGCTGCTGCTGCTGATGCAGAAAGTGCATTGAAAGAGAAACATCGTATTTATGCAGAGCAGAGAAAGCCATTAGAAGACTACTATAGGAAACAGAAGAAGCTTCTAGACTTTCAAGTGGCTGGTGGACCTGGAGAGACATGGCAGGGTCTCTTGGCTGCTCTACATCTTCAGCATATGAGTGCTGTCAGTTCTTCACAAATACTATCGGCGTGA

Network for GWHGAAZE033342

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00406.23	ADK	91	230	9.20E-19

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00939	adk, AK	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Purine metabolism	map00230
		Thiamine metabolism	map00730

Gene Ontology

GO term	Ontology	Name
GO:0006139	biological_process	nucleobase-containing compound metabolic process
GO:0005524	molecular_function	ATP binding
GO:0019205	molecular_function	nucleobase-containing compound kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	43.157
	SRR3591706	second leaf	19.539
	SRR3591707	mature leaf	17.298
	SRR3591708	Shoot apex	24.311
	SRR3591709	Stem	29.778
	SRR3591710	White floral bud	48.895
	SRR3591711	White flower	72.596
	SRR3591712	Green floral bud	50.577
	SRR3591713	Yellow flower	118.194
SRP173429	SRR8316895	Juvenile bud stage	57.333
	SRR8316896	Juvenile bud stage	90.240
	SRR8316897	Juvenile bud stage	45.339
	SRR8316894	Third green stage	24.215
	SRR8316900	Third green stage	71.239
	SRR8316901	Third green stage	84.711
	SRR8316898	Complete white stage	21.064
	SRR8316899	Complete white stage	55.488
	SRR8316903	Complete white stage	32.195
	SRR8316902	Silver flowering stage	30.022
	SRR8316904	Silver flowering stage	36.940
	SRR8316905	Silver flowering stage	14.598
	SRR8316906	Gold flowering stage	77.730
	SRR8316907	Gold flowering stage	70.241
	SRR8316908	Gold flowering stage	72.623
SRP132670	SRR6706286	Control	37.575
	SRR6706287	Light intensity 50%	44.048
	SRR6706288	Light intensity 20%	40.944
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	50.249
	CNS0095593	Slightly white alabastrum(diploid) 2	52.352
	CNS0095594	Slightly white alabastrum(diploid) 3	51.101
	CNS0095595	Whole white alabastrum(diploid) 2	77.530
	CNS0095596	Whole white alabastrum(diploid) 3	60.616
	CNS0095597	Whole white alabastrum(diploid) 4	57.097
	CNS0095598	Silvery flower (diploied) 1	45.255
	CNS0095599	Silvery flower (diploied) 2	67.630
	CNS0095600	Silvery flower (diploied) 3	84.862
	CNS0095601	Golden flower (diploid) 1	40.769
	CNS0095602	Golden flower (diploid) 2	101.783
	CNS0095603	Golden flower (diploid) 3	97.439
	CNS0095604	Slightly white alabastrum(tetraploid) 1	56.246
	CNS0095605	Slightly white alabastrum(tetraploid) 2	49.036
	CNS0095606	Slightly white alabastrum(tetraploid) 3	26.422
	CNS0095607	Whole white alabastrum(tetraploid) 1	52.261
	CNS0095608	Whole white alabastrum(tetraploid) 2	52.766
	CNS0095609	Whole white alabastrum(tetraploid) 3	48.162
	CNS0095610	Silvery flower (diploied) 1	46.983
	CNS0095611	Silvery flower (diploied) 2	43.468
	CNS0095612	Silvery flower (diploied) 3	73.790
	CNS0095613	Golden flower (tetraploid) 1	43.193
	CNS0095614	Golden flower (tetraploid) 2	62.047
	CNS0095615	Golden flower (tetraploid) 3	45.411
CRA001975	CRR073297	Stem 1	38.247
	CRR073298	Stem 2	36.164
	CRR073299	Stem 3	32.614
	CRR073300	Leaf 1	67.762
	CRR073301	Leaf 2	79.020
	CRR073302	Leaf 3	42.876
	CRR073303	Juvenile bud 1	44.616
	CRR073304	Juvenile bud 2	35.636
	CRR073305	Juvenile bud 3	37.974
	CRR073306	Third green 1	68.493
	CRR073307	Third green 2	65.032
	CRR073308	Third green 3	60.792
	CRR073309	Second white 1	76.231
	CRR073310	Second white 2	107.011
	CRR073311	Second white 3	98.319
	CRR073312	Silver flowering 1	145.230
	CRR073313	Silver flowering 2	140.040
	CRR073314	Silver flowering 3	156.851
	CRR073315	Gold flowering 1	11.425
	CRR073316	Gold flowering 2	15.830
	CRR073317	Gold flowering 3	14.610
	CRR073318	Tawny withering 1	19.618
	CRR073319	Tawny withering 2	39.734
	CRR073320	Tawny withering 3	23.835