Gene detail

Detail information of GWHGAAZE033721

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU22002.1	6.4221E-132	hypothetical protein MIMGU_mgv1a001593mg [Erythranthe guttata]
Swissprot	tr\|Q0JA83\|KSL3_ORYSJ	3E-116	Ent-kaurene synthase-like 3
trEMBL	tr\|A0A022Q0D3\|A0A022Q0D3_ERYGU	2E-132	Uncharacterized protein {ECO:0000313\|EMBL:EYU22002.1}
TAIR10	AT1G79460.1	2E-66	Terpenoid cyclases/Protein prenyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000122	gene	977641	994016	+
GWHAAZE00000122	mRNA	977641	994016	+
GWHAAZE00000122	exon	977641	977779	+
GWHAAZE00000122	exon	978372	978552	+
GWHAAZE00000122	exon	979590	979813	+
GWHAAZE00000122	exon	979936	980056	+
GWHAAZE00000122	exon	980167	980264	+
GWHAAZE00000122	exon	982957	983029	+
GWHAAZE00000122	exon	989272	989370	+
GWHAAZE00000122	exon	989948	990163	+
GWHAAZE00000122	exon	991035	991182	+
GWHAAZE00000122	exon	991788	992030	+
GWHAAZE00000122	exon	993711	994016	+
GWHAAZE00000122	CDS	977641	977779	+
GWHAAZE00000122	CDS	978372	978552	+
GWHAAZE00000122	CDS	979590	979813	+
GWHAAZE00000122	CDS	979936	980056	+
GWHAAZE00000122	CDS	980167	980264	+
GWHAAZE00000122	CDS	982957	983029	+
GWHAAZE00000122	CDS	989272	989370	+
GWHAAZE00000122	CDS	989948	990163	+
GWHAAZE00000122	CDS	991035	991182	+
GWHAAZE00000122	CDS	991788	992030	+
GWHAAZE00000122	CDS	993711	994016	+

Transcript Sequence
>GWHTAAZE033761 ATGGAGAATCAAAAGGCAGATGGTTCGTGGGGATTAAGTTCCAACCTTCCATCACTTGTTAAAGATTCTCTTTCTTCCACACTAGCTTGTGTACTTGCCCTTCAAAAATGGAAAGTCGGCGAACAACTTGTTCAAAAAGGACTGGACTTTATTGGGTCAAAGAGATATGCTGTGATGGACAAACACCAGTCTTCTCCAATTGGGTTTGATATCATATTCCCGAGCATGATTAATTACGCTAACGAATTGGGTTTGAATCTGCCTCTTGACTCAGATTTTGTGGACATAATGCTACGGAATCGAGTCCTTCAACTTCAAAGCAATAATAGAAAAATCAGTTTCAGGGGAAAGGAAGGCCATCTTGTATACTTTGCTGAAGGATTGGATGCATCATATGAGTGGAAGGAGGTGATGAAGAATCAACAAAGAAGTAATGGTTCTCTTTTTAATTCCCCTGCCACTTCAGCAGCTGCATTGATTCAGTTTCATGATGACAAATGTTTTGACTACTTGCAGTCCCTTTCAAAAATTCATGGAAAAGCAGTCCCTACCATTTATCCATTTGATGTATATTCCCGTCTGTGCATGGTGGATATTGTCGATAGGCTGGGGATAAATCGATATTTCAAACATGAGATAGAAATTATTTTGGACGAAACGCACAGGTGTTGGCAACAGAGAAGTGAAGAGATTATTTTGGATGTAAGTTGTTGTGCCTTGGCATTTCGGCTATTAAGAATGAATGGATATGAAGTTTCTTCAGACCGACTTAAGCACAGAAGAGGCATAGAGCTGTATAATCCTGATGATTTTCAAATGCTCAAAACATCTTATAGGTGTTCCAATACCGATAACAGAGACTTGCTTATGTTTTCAATTCAAGATTTTAACATGTGTCAAGCCATACATCATGAAGAGATTAAGAAACTAGAGAAATGGGTGAAAGATAGTGAAATGATGACTCTGGACATTGATTGGCATATATTGATTTCTTCCTATATCCAACTTTCTTGCATTCACTTTGAACCCGAATTAGCTAATATCCGGATTGCGTGGACCCAGAATAGTTTTGTTGGAACTTTTGTTGATGATATGTTTGACGTTGATGGCTCCAGGGAAGAACTACTCAACCTTATTGAATTGCTTAAAAAGTGGACTGGGAATTCAGATGTTGATGGTTACTACTGCTCCAAACGAAATGAGATTTTATTTTCAGCAGTTCAAGAAATAATAAACGAGCAAGCTGCTAATGGTTTCATTGCACAGGGACGATGTATCAAGCATGAGATACTTGAAATATGGGCTGAATTTCTCAAGTGTAGCTTACAAGAGGTGGACTGGTGGACAAACAATGCAGCACCAACAATGGATGAATATATCACAAATAGAGGTCCAACAATTGGGATTGGACTTTATTCTATTAATTTCTACTTTCTCGGGCCCCAACTTTCAAAGGATCTTTTCAGAAGTGAAGAATATCGTACTCTATTCAGGCATGCCGGCATAATCGGAGGGCTTTTCAATGATTATCAAGGCCTCGAGAGAGACAAAATACAAAGGAAGGTGAATGGTTGTTTCTTAATGGTAAGACATGGTAATGGTGCAATAGCTGAAGAAATGGCTAGGACCGAGGTGAGGAGAATGATCGAAAGGAGCAAGAGAGAAGTGTTACGTTTGTTGGTTCAAAAGAAATCGAGCTCAATTCCAAAAGGGTTAATTGAATCATTTTTCAAGGTGTACACAGTATTCTATTATCTATACAACAGCAGTGATGAATACAGGAATCCAGGAAGAATGTTTGAGGAAATAAATGCTCTTCTTTATGAGCCACTCATTCTCCCCGCTTGA

Network for GWHGAAZE033721

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01397.22	Terpene_synth	134	260	5.40E-30
PF03936.17	Terpene_synth_C	289	554	4.90E-45

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K04121	E4.2.3.19	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Diterpenoid biosynthesis	map00904

Gene Ontology

GO term	Ontology	Name
GO:0010333	molecular_function	terpene synthase activity
GO:0016829	molecular_function	lyase activity
GO:0000287	molecular_function	magnesium ion binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.047
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.254
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.020
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.156
	SRR8316894	Third green stage	0.102
	SRR8316900	Third green stage	0.118
	SRR8316901	Third green stage	0.399
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.236
	SRR8316903	Complete white stage	0.110
	SRR8316902	Silver flowering stage	0.091
	SRR8316904	Silver flowering stage	0.022
	SRR8316905	Silver flowering stage	0.063
	SRR8316906	Gold flowering stage	0.082
	SRR8316907	Gold flowering stage	0.064
	SRR8316908	Gold flowering stage	0.246
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.043
	CNS0095593	Slightly white alabastrum(diploid) 2	0.183
	CNS0095594	Slightly white alabastrum(diploid) 3	0.108
	CNS0095595	Whole white alabastrum(diploid) 2	0.078
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.045
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.089
	CNS0095600	Silvery flower (diploied) 3	0.045
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.000
	CNS0095604	Slightly white alabastrum(tetraploid) 1	2.309
	CNS0095605	Slightly white alabastrum(tetraploid) 2	3.316
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.016
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.872
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.512
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.318
	CNS0095610	Silvery flower (diploied) 1	0.113
	CNS0095611	Silvery flower (diploied) 2	0.022
	CNS0095612	Silvery flower (diploied) 3	0.018
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.038
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.012
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.040
	CRR073319	Tawny withering 2	0.069
	CRR073320	Tawny withering 3	0.000