Gene detail

Detail information of GWHGAAZE033782

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AFO84084.1	1.3375E-174	hexokinase [Actinidia deliciosa]
COG	YP_001679802.1	1E-39	hexokinase
Swissprot	tr\|Q42525\|HXK1_ARATH	2E-164	Hexokinase-1
trEMBL	tr\|S4SKB5\|S4SKB5_ACTDE	5E-175	Hexokinase {ECO:0000313\|EMBL:AFO84084.1}
TAIR10	AT4G29130.1	6E-133	hexokinase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000136	gene	143123	151534	+
GWHAAZE00000136	mRNA	143123	151534	+
GWHAAZE00000136	exon	143123	143211	+
GWHAAZE00000136	exon	147566	147701	+
GWHAAZE00000136	exon	148092	148274	+
GWHAAZE00000136	exon	149767	149841	+
GWHAAZE00000136	exon	150302	150457	+
GWHAAZE00000136	exon	151228	151326	+
GWHAAZE00000136	exon	151424	151534	+
GWHAAZE00000136	CDS	143123	143211	+
GWHAAZE00000136	CDS	147566	147701	+
GWHAAZE00000136	CDS	148092	148274	+
GWHAAZE00000136	CDS	149767	149841	+
GWHAAZE00000136	CDS	150302	150457	+
GWHAAZE00000136	CDS	151228	151326	+
GWHAAZE00000136	CDS	151424	151534	+

Transcript Sequence
>GWHTAAZE033822 ATGCTGGTGGAGATGCACGCCGGTCTCGCCTCCGAAGGCGGCAGTAAACTCAAGATGCTCATCAGCTATGTCGATAACCTCCCCACCGGAGATGAGAAAGGATTATTTTATGCATTGGACCTGGGTGGCACAAACTTCCGTGTTTTGCGTGTACAATTGGGTGGGAAAGAAAAACATGTTGTTAAACAAGAATTTGATGAAGTTTCAATTCCTCCACATTTGATGGCATTATTTGATTTTATTGCGACGGCACTTGCAAAATTTGTTGCTACGGAAGGTGAAGATACTCATCTTTTGAGTGGTAGACAAAGAGAGCTGGGATTCACTTTTTCCTTTCCAGTTAGGCAATCATCAATTGCATCTGGGAGTCTTATTAACTGGACGAAAGGCTTCTCTATAGAAGATGCGATTGGACAAGATGTTGTGGGGGAGTTGACCAAAGCGATGGAAAGAGTTGGCGTTGATATGCGAGTGTCTGCTTTGGTCAATGATACCATTGGAACATTAGCAAGAGGTAGATACAATAACCCAGGCGTAATTGCTGCTGTTATATTGGGTACTGGAACAAATGCAGCATATATAGAGCGGGCACATGCAATACCTAAGTGGCATGGTCTGCTCCCAAAATCAGGAGAGATGGTTATCAACATTGAATGGGGTAACTTCCGGACATCACATCTTCCACTCACTGAATATGATACAGCTTTGGATGTTGAGAGTTTGAACCCAGGCGAGCAGATTTTTGAGAAGATTATTTCTGGCATGTATTTGGGTGAAATTATGCAGAGAGTCCTATGCAGTATGGCGGAGGAAGCTTCCTTTTCGGTGATATTGTTCCTCCAAAACTGA

Network for GWHGAAZE033782

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00349.22	Hexokinase_1	2	174	8.80E-57
PF03727.17	Hexokinase_2	181	272	1.90E-36

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00844	HK	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Glycolysis / Gluconeogenesis	map00010
		Fructose and mannose metabolism	map00051
		Galactose metabolism	map00052
		Starch and sucrose metabolism	map00500
		Amino sugar and nucleotide sugar metabolism	map00520
		Streptomycin biosynthesis	map00521
		Neomycin, kanamycin and gentamicin biosynthesis	map00524
		HIF-1 signaling pathway	map04066
		Insulin signaling pathway	map04910
		Carbohydrate digestion and absorption	map04973

Gene Ontology

GO term	Ontology	Name
GO:0001678	biological_process	cellular glucose homeostasis
GO:0005975	biological_process	carbohydrate metabolic process
GO:0004396	molecular_function	hexokinase activity
GO:0005524	molecular_function	ATP binding
GO:0005536	molecular_function	glucose binding
GO:0016773	molecular_function	phosphotransferase activity, alcohol group as acceptor

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	7.876
	SRR3591706	second leaf	1.269
	SRR3591707	mature leaf	0.323
	SRR3591708	Shoot apex	3.453
	SRR3591709	Stem	2.794
	SRR3591710	White floral bud	41.014
	SRR3591711	White flower	9.234
	SRR3591712	Green floral bud	12.247
	SRR3591713	Yellow flower	4.324
SRP173429	SRR8316895	Juvenile bud stage	1.304
	SRR8316896	Juvenile bud stage	4.728
	SRR8316897	Juvenile bud stage	3.562
	SRR8316894	Third green stage	2.658
	SRR8316900	Third green stage	9.397
	SRR8316901	Third green stage	10.099
	SRR8316898	Complete white stage	16.011
	SRR8316899	Complete white stage	29.061
	SRR8316903	Complete white stage	26.097
	SRR8316902	Silver flowering stage	6.744
	SRR8316904	Silver flowering stage	8.954
	SRR8316905	Silver flowering stage	1.917
	SRR8316906	Gold flowering stage	2.834
	SRR8316907	Gold flowering stage	5.242
	SRR8316908	Gold flowering stage	5.215
SRP132670	SRR6706286	Control	8.897
	SRR6706287	Light intensity 50%	10.420
	SRR6706288	Light intensity 20%	10.152
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.976
	CNS0095593	Slightly white alabastrum(diploid) 2	1.757
	CNS0095594	Slightly white alabastrum(diploid) 3	1.009
	CNS0095595	Whole white alabastrum(diploid) 2	2.969
	CNS0095596	Whole white alabastrum(diploid) 3	3.021
	CNS0095597	Whole white alabastrum(diploid) 4	3.499
	CNS0095598	Silvery flower (diploied) 1	2.524
	CNS0095599	Silvery flower (diploied) 2	1.442
	CNS0095600	Silvery flower (diploied) 3	7.813
	CNS0095601	Golden flower (diploid) 1	1.691
	CNS0095602	Golden flower (diploid) 2	4.857
	CNS0095603	Golden flower (diploid) 3	4.681
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.225
	CNS0095605	Slightly white alabastrum(tetraploid) 2	2.803
	CNS0095606	Slightly white alabastrum(tetraploid) 3	14.009
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.278
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.351
	CNS0095609	Whole white alabastrum(tetraploid) 3	9.317
	CNS0095610	Silvery flower (diploied) 1	18.088
	CNS0095611	Silvery flower (diploied) 2	11.886
	CNS0095612	Silvery flower (diploied) 3	18.043
	CNS0095613	Golden flower (tetraploid) 1	4.503
	CNS0095614	Golden flower (tetraploid) 2	9.281
	CNS0095615	Golden flower (tetraploid) 3	6.625
CRA001975	CRR073297	Stem 1	2.919
	CRR073298	Stem 2	3.580
	CRR073299	Stem 3	3.792
	CRR073300	Leaf 1	6.927
	CRR073301	Leaf 2	6.649
	CRR073302	Leaf 3	9.705
	CRR073303	Juvenile bud 1	10.899
	CRR073304	Juvenile bud 2	7.218
	CRR073305	Juvenile bud 3	28.133
	CRR073306	Third green 1	7.795
	CRR073307	Third green 2	5.027
	CRR073308	Third green 3	7.267
	CRR073309	Second white 1	3.376
	CRR073310	Second white 2	1.433
	CRR073311	Second white 3	2.074
	CRR073312	Silver flowering 1	1.800
	CRR073313	Silver flowering 2	4.459
	CRR073314	Silver flowering 3	2.804
	CRR073315	Gold flowering 1	0.417
	CRR073316	Gold flowering 2	2.880
	CRR073317	Gold flowering 3	0.819
	CRR073318	Tawny withering 1	0.322
	CRR073319	Tawny withering 2	0.418
	CRR073320	Tawny withering 3	1.933