Detail information of GWHGAAZE033936


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009779400.10PREDICTED: protein ECERIFERUM 1-like [Nicotiana sylvestris]
COGYP_006918135.15E-13hypothetical protein M5M_16375
Swissprottr|F4HVY0|CER1_ARATH0Protein ECERIFERUM 1
trEMBLtr|M1D7C0|M1D7C0_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400083908}
TAIR10AT1G02205.28E-146Fatty acid hydroxylase superfamily

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000145gene13080921319886+
GWHAAZE00000145mRNA13080921319886+
GWHAAZE00000145exon13080921308278+
GWHAAZE00000145exon13085441308763+
GWHAAZE00000145exon13090881309463+
GWHAAZE00000145exon13096231309737+
GWHAAZE00000145exon13098331310029+
GWHAAZE00000145exon13112811311373+
GWHAAZE00000145exon13120251312198+
GWHAAZE00000145exon13196321319886+
GWHAAZE00000145CDS13080921308278+
GWHAAZE00000145CDS13085441308763+
GWHAAZE00000145CDS13090881309463+
GWHAAZE00000145CDS13096231309737+
GWHAAZE00000145CDS13098331310029+
GWHAAZE00000145CDS13112811311373+
GWHAAZE00000145CDS13120251312198+
GWHAAZE00000145CDS13196321319886+
Transcript Sequence

Network for GWHGAAZE033936

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04116.14FA_hydroxylase231621.30E-21
PF12076.9Wax2_C3444646.20E-41
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15404K15404, CER1 Biosynthesis of secondary metabolites map01110
Cutin, suberine and wax biosynthesismap00073

Gene Ontology

GO term OntologyName
GO:0008610biological_processlipid biosynthetic process
GO:0055114biological_processoxidation-reduction process
GO:0005506molecular_functioniron ion binding
GO:0016491molecular_functionoxidoreductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.482
SRR3591706second leaf0.658
SRR3591707mature leaf0.928
SRR3591708Shoot apex0.803
SRR3591709Stem0.289
SRR3591710White floral bud1.239
SRR3591711White flower1.278
SRR3591712Green floral bud0.921
SRR3591713Yellow flower0.364
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.101
SRR8316897Juvenile bud stage 0.114
SRR8316894Third green stage 0.003
SRR8316900Third green stage 0.045
SRR8316901Third green stage 0.000
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.064
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.029
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.005
SRR8316908Gold flowering stage 0.029
SRP132670SRR6706286Control0.092
SRR6706287Light intensity 50%0.092
SRR6706288Light intensity 20%0.049
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.243
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.073
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.058
CNS0095599Silvery flower (diploied) 20.106
CNS0095600Silvery flower (diploied) 30.095
CNS0095601Golden flower (diploid) 10.476
CNS0095602Golden flower (diploid) 20.318
CNS0095603Golden flower (diploid) 30.374
CNS0095604Slightly white alabastrum(tetraploid) 10.024
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.006
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (diploied) 10.000
CNS0095611Silvery flower (diploied) 20.000
CNS0095612Silvery flower (diploied) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.018
CRR073298Stem 20.016
CRR073299Stem 30.026
CRR073300Leaf 10.021
CRR073301Leaf 20.000
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.048
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.039
CRR073316Gold flowering 20.032
CRR073317Gold flowering 30.062
CRR073318Tawny withering 10.588
CRR073319Tawny withering 21.383
CRR073320Tawny withering 30.040