LjaFGD


Comparision between CFinderModule0080 and CFinderModule0272

Protein:Yellow color-overlap protein     Green color--Module1 member     Darkgreen color--Module2 member.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Module IDFunction AnnotationP valueFDR
CFinderModule0080Transcription factor B3 family Transcription factor B30.0042366590.004236659
CFinderModule0080map04130 SNARE interactions in vesicular transport0.0048535040.013482867
CFinderModule0080map04138 Autophagy - yeast0.0089885780.013482867
CFinderModule0080GO:0016192 vesicle-mediated transport GOslim:biological_process0.0103936450.017564533
CFinderModule0080GO:0006886 intracellular protein transport GOslim:biological_process0.0117096880.017564533
CFinderModule0272CYTOCHROME_P616_Family CYTOCHROME_P616_Family0.0001767670.000176767
CFinderModule0272GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GOslim:molecular_function0.000719830.003209292
CFinderModule0272GO:0005506 iron ion binding GOslim:molecular_function0.0008735060.003209292
CFinderModule0272GO:0020037 heme binding GOslim:molecular_function0.0011553450.003209292
CFinderModule0272map00906 Carotenoid biosynthesis0.0057342680.005734268
CFinderModule0272GO:0055114 oxidation-reduction process GOslim:biological_process0.008081640.00808164

2.Module member annotation

Gene IDAnnotation
GWHGAAZE010918AT5G15340.1 Pentatricopeptide repeat (PPR) superfamily protein
GWHGAAZE010919AT5G39510.1 Vesicle transport v-SNARE family protein
GWHGAAZE018542AT3G19270.1 cytochrome P450, family 707, subfamily A, polypeptide 4
GWHGAAZE023208AT3G18990.1 AP2/B3-like transcriptional factor family protein
GWHGAAZE027644AT2G45580.1 cytochrome P450, family 76, subfamily C, polypeptide 3