LjaFGD


Comparision between CFinderModule0244 and CFinderModule0277

Protein:Yellow color-overlap protein     Green color--Module1 member     Darkgreen color--Module2 member.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Module IDFunction AnnotationP valueFDR
CFinderModule0244Transcription factor SET family Transcription factor SET0.0098560390.009856039
CFinderModule0244GO:0048037 cofactor binding GOslim:molecular_function0.0023544290.012949359
CFinderModule0244GO:0018024 histone-lysine N-methyltransferase activity GOslim:molecular_function0.005173340.014226685

2.Module member annotation

Gene IDAnnotation
GWHGAAZE003897AT3G03773.2 HSP20-like chaperones superfamily protein
GWHGAAZE016127AT4G22000.1 tyrosine sulfotransferase-like protein;(source:Araport11)
GWHGAAZE016146AT1G76710.2 SET domain group 26
GWHGAAZE018205AT1G53345.1 DHHA1 domain protein;(source:Araport11)
GWHGAAZE021932AT3G24010.1 RING/FYVE/PHD zinc finger superfamily protein
GWHGAAZE022264AT5G49540.1 Rab5-interacting family protein
GWHGAAZE022300AT5G30495.2 Fcf2 pre-rRNA processing protein
GWHGAAZE026276AT3G16380.1 poly(A) binding protein 6
GWHGAAZE030814AT5G51040.1 Encodes succinate dehydrogenase assembly factor 2 (SDHAF2), a low abundance mitochondrial protein needed for assembly and activity of mitochondrial complex II and for normal root elongation.Sdhaf2 knockdown line showed lowered SDH1 protein abundance, lowered maximal SDH activity and less protein-bound FAD at the molecular mass of SDH1.
GWHGAAZE031167AT1G51560.1 Pyridoxamine 5'-phosphate oxidase family protein