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LjaFGD

CFinderModule0245's detailed annotation

Pink：Interaction line:

This network produced by cytoscapeweb

Module annotation (GSEA enrichment result)

Function Annotation	P value	FDR
map03022 Basal transcription factors	0.000167204	0.0024579
GO:0005685 U1 snRNP GOslim:cellular_component	0.002266038	0.003399057
GO:0005669 transcription factor TFIID complex GOslim:cellular_component	0.002266038	0.003399057
GO:0006376 mRNA splice site selection GOslim:biological_process	0.001619075	0.004857226
GO:0006352 DNA-templated transcription, initiation GOslim:biological_process	0.007106122	0.010659183
GO:0003676 nucleic acid binding GOslim:molecular_function	0.00269589	0.022158479
GO:0003729 mRNA binding GOslim:molecular_function	0.003881777	0.022158479
map03040 Spliceosome	0.003093344	0.022736082
map04657 IL-17 signaling pathway	0.008071574	0.039550711

Module member annotation

Gene ID	Ortholog in Arabidopsis	Annotation in Arabidopsis
GWHGAAZE013874	AT5G66100.1	winged-helix DNA-binding transcription factor family protein
GWHGAAZE014836	AT3G50670.1	U1 small nuclear ribonucleoprotein-70K
GWHGAAZE017280	AT1G17440.2	Transcription initiation factor TFIID subunit A
GWHGAAZE017281	AT1G17440.2	Transcription initiation factor TFIID subunit A
GWHGAAZE020749	AT2G11010.1	hypothetical protein;(source:Araport11)
GWHGAAZE020750	AT2G17525.1	Pentatricopeptide repeat (PPR) superfamily protein
GWHGAAZE026413	AT5G51410.3	LUC7 N_terminus domain-containing protein
GWHGAAZE029696	AT1G15200.1	protein-protein interaction regulator family protein
GWHGAAZE031155	AT3G21215.1	RNA-binding (RRM/RBD/RNP motifs) family protein
GWHGAAZE033186	AT1G03360.1	ribosomal RNA processing 4
GWHGAAZE033814	AT1G02840.3	RNA-binding (RRM/RBD/RNP motifs) family protein

Direct connection functional modules

Module ID	Function Annotation	Overlap condition
CFinderModule0040	GO:0008097 5S rRNA binding GOslim:molecular_function map03040 Spliceosome GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity GOslim:molecular_function	details
CFinderModule0193	GO:0005509 calcium ion binding GOslim:molecular_function	details