LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE002261

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE002261

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE002261AT5G10280.1myb domain protein 921positive
GWHGAAZE010005AT3G29290.1Pentatricopeptide repeat (PPR) superfamily protein0.95positive
GWHGAAZE004764AT4G27290.1S-locus lectin protein kinase family protein0.95positive
GWHGAAZE010004AT5G57685.1glutamine dumper 30.95positive
GWHGAAZE017195AT1G52950.1Nucleic acid-binding, OB-fold-like protein0.95positive
GWHGAAZE010007AT4G12020.1protein kinase family protein0.95positive
GWHGAAZE017578AT2G24130.1Leucine-rich receptor-like protein kinase family protein0.95positive
GWHGAAZE032133AT4G19810.1Glycosyl hydrolase family protein with chitinase insertion domain0.95positive
GWHGAAZE008313AT3G03300.3dicer-like 20.95positive
GWHGAAZE033879AT5G40100.1Disease resistance protein (TIR-NBS-LRR class) family0.95positive
GWHGAAZE000844AT2G22660.2Protein of unknown function (duplicated DUF1399)0.95positive
GWHGAAZE030874AT1G43770.1RING/FYVE/PHD zinc finger superfamily protein0.92positive
GWHGAAZE000465AT5G28950.1nuclease;(source:Araport11)0.91positive
GWHGAAZE011597AT3G15950.1DNA topoisomerase-related0.89positive
GWHGAAZE032897AT1G48120.1hydrolases;protein serine/threonine phosphatases0.88positive
GWHGAAZE010831----0.86positive


Expression profiling, GSEA and motif analysis