LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE003367

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE003367

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE003367AT2G42850.1cytochrome P450, family 7181positive
GWHGAAZE015141AT2G15180.1Zinc knuckle (CCHC-type) family protein0.92positive
GWHGAAZE010365AT4G20270.1Leucine-rich receptor-like protein kinase family protein0.91positive
GWHGAAZE006506AT4G29090.1Ribonuclease H-like superfamily protein0.91positive
GWHGAAZE008743AT2G24650.1DNA binding;DNA binding;sequence-specific DNA binding transcription factors0.91positive
GWHGAAZE015892AT4G21660.1proline-rich spliceosome-associated (PSP) family protein0.91positive
GWHGAAZE028568AT2G01050.1zinc ion binding;nucleic acid binding0.91positive
GWHGAAZE024184AT2G04865.1Aminotransferase-like, plant mobile domain family protein0.91positive
GWHGAAZE017737AT1G65780.1P-loop containing nucleoside triphosphate hydrolases superfamily protein0.91positive
GWHGAAZE021480AT1G60730.1NAD(P)-linked oxidoreductase superfamily protein0.91positive
GWHGAAZE020937AT2G43890.1Pectin lyase-like superfamily protein0.91positive
GWHGAAZE028527----0.91positive
GWHGAAZE019010AT5G03980.1SGNH hydrolase-type esterase superfamily protein0.91positive
GWHGAAZE010298AT3G04650.1FAD/NAD(P)-binding oxidoreductase family protein0.91positive
GWHGAAZE013611AT1G10590.2Nucleic acid-binding, OB-fold-like protein0.91positive
GWHGAAZE015689AT3G47110.1Leucine-rich repeat protein kinase family protein0.91positive
GWHGAAZE010348AT1G64260.1MuDR family transposase0.91positive
GWHGAAZE011421----0.91positive
GWHGAAZE002009AT4G12560.2F-box and associated interaction domains-containing protein0.91positive
GWHGAAZE015670AT3G47580.1Leucine-rich repeat protein kinase family protein0.91positive
GWHGAAZE033811AT1G76690.112-oxophytodienoate reductase 20.91positive
GWHGAAZE015576AT5G59900.1Pentatricopeptide repeat (PPR) superfamily protein0.91positive
GWHGAAZE010523AT3G57030.1Calcium-dependent phosphotriesterase superfamily protein0.91positive
GWHGAAZE011292AT3G51550.1Malectin/receptor-like protein kinase family protein0.9positive
GWHGAAZE017189----0.9positive
GWHGAAZE019999AT2G29100.1glutamate receptor 2.90.9positive
GWHGAAZE013281AT4G00230.1xylem serine peptidase 10.9positive
GWHGAAZE027548AT5G36670.1RING/FYVE/PHD zinc finger superfamily protein0.9positive
GWHGAAZE013303AT3G14460.1LRR and NB-ARC domains-containing disease resistance protein0.89positive
GWHGAAZE023613----0.89positive
GWHGAAZE023320AT1G28390.1Protein kinase superfamily protein0.89positive
GWHGAAZE029448AT3G54070.1Ankyrin repeat family protein0.89positive
GWHGAAZE002466AT1G59720.1Tetratricopeptide repeat (TPR)-like superfamily protein0.89positive
GWHGAAZE001763AT3G07870.1F-box and associated interaction domains-containing protein0.88positive
GWHGAAZE020557AT1G09720.1Kinase interacting (KIP1-like) family protein0.88positive
GWHGAAZE024698AT1G57820.2Zinc finger (C3HC4-type RING finger) family protein0.88positive
GWHGAAZE008429----0.87positive
GWHGAAZE019565AT3G14460.1LRR and NB-ARC domains-containing disease resistance protein0.87positive
GWHGAAZE033605AT5G17680.1disease resistance protein (TIR-NBS-LRR class), putative0.86positive
GWHGAAZE001832AT4G14130.1xyloglucan endotransglucosylase/hydrolase 150.86positive


Expression profiling, GSEA and motif analysis