LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE007235

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE007235

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE007235AT3G56630.1cytochrome P450, family 94, subfamily D, polypeptide 21positive
GWHGAAZE019301AT1G74010.1Calcium-dependent phosphotriesterase superfamily protein0.94positive
GWHGAAZE017077AT5G20630.1germin 30.94positive
GWHGAAZE025363AT3G04290.1Li-tolerant lipase 10.92positive
GWHGAAZE025582AT4G03230.1S-locus lectin protein kinase family protein0.91positive
GWHGAAZE004084AT1G22360.1UDP-glucosyl transferase 85A20.91positive
GWHGAAZE003946AT1G22340.1UDP-glucosyl transferase 85A70.9positive
GWHGAAZE006047----0.9positive
GWHGAAZE017328AT1G72970.1Glucose-methanol-choline (GMC) oxidoreductase family protein0.9positive
GWHGAAZE006723AT2G34430.1light-harvesting chlorophyll-protein complex II subunit B10.89positive
GWHGAAZE004085AT1G22400.1UDP-Glycosyltransferase superfamily protein0.89positive
GWHGAAZE011295----0.89positive
GWHGAAZE029784AT1G70210.1CYCLIN D1;10.89positive
GWHGAAZE010498AT5G12890.1UDP-Glycosyltransferase superfamily protein0.89positive
GWHGAAZE022531AT2G01630.1O-Glycosyl hydrolases family 17 protein0.88positive
GWHGAAZE013802AT4G38260.1Protein of unknown function (DUF833)0.88positive
GWHGAAZE026259AT1G65450.2HXXXD-type acyl-transferase family protein0.88positive
GWHGAAZE003249AT1G22380.1UDP-glucosyl transferase 85A30.87positive
GWHGAAZE024616AT2G19070.1spermidine hydroxycinnamoyl transferase0.87positive
GWHGAAZE030556AT5G50090.1D-ribose-binding periplasmic protein;(source:Araport11)0.87positive
GWHGAAZE027628----0.87positive
GWHGAAZE029904AT2G14050.1minichromosome maintenance 90.87positive
GWHGAAZE016571AT1G75430.1BEL1-like homeodomain 110.87positive
GWHGAAZE009939AT2G30620.1winged-helix DNA-binding transcription factor family protein0.87positive
GWHGAAZE015806AT3G04290.1Li-tolerant lipase 10.87positive
GWHGAAZE016623AT1G75820.1Leucine-rich receptor-like protein kinase family protein0.86positive
GWHGAAZE000280----0.86positive
GWHGAAZE013781AT1G20925.1Auxin efflux carrier family protein0.86positive
GWHGAAZE007356AT5G38110.1anti- silencing function 1b0.86positive
GWHGAAZE003337AT3G51740.1inflorescence meristem receptor-like kinase 20.86positive
GWHGAAZE015331AT4G29400.1Protein of unknown function (DUF3531)0.86positive
GWHGAAZE005725AT3G26330.1cytochrome P450, family 71, subfamily B, polypeptide 370.86positive
GWHGAAZE010497AT5G12890.1UDP-Glycosyltransferase superfamily protein0.86positive


Expression profiling, GSEA and motif analysis