Coexpression Network

Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE008828

Gene:
Yellow--query gene Green--co-expressed genes Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage
Complete white stage/Juvenile bud stage
Silver flowering stage/Juvenile bud stage
Gold flowering stage/Juvenile bud stage
Complete white stage/Third green stage
Silver flowering stage/Third green stage
Gold flowering stage/Third green stage
Silver flowering stage/Complete white stage
Gold flowering stage/Complete white stage
Gold flowering stage/Silver flowering stage

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)

Co-expressed genes of GWHGAAZE008828

Co-expression relationship

ID	Ortholog in Arabidopsis	Annotation	PCC	Relationship
GWHGAAZE008828	AT2G26990.1	proteasome family protein	1	positive
GWHGAAZE001708	AT5G51220.1	ubiquinol-cytochrome C chaperone family protein	0.9	positive
GWHGAAZE017820	AT3G47610.1	transcription regulators;zinc ion binding	0.88	positive
GWHGAAZE004284	AT1G16470.2	proteasome subunit PAB1	0.87	positive
GWHGAAZE025184	AT3G52120.1	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein	0.87	positive
GWHGAAZE014594	AT3G50360.1	centrin2	0.87	positive
GWHGAAZE026240	AT2G35610.1	xyloglucanase 113	0.87	positive
GWHGAAZE002154	AT5G44280.2	RING 1A	0.86	positive

Expression profiling, GSEA and motif analysis