LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE011125

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE011125

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE011125AT1G79460.1Terpenoid cyclases/Protein prenyltransferases superfamily protein1positive
GWHGAAZE014566----0.97positive
GWHGAAZE002495AT1G63205.1Cystatin/monellin superfamily protein0.97positive
GWHGAAZE023139AT3G51550.1Malectin/receptor-like protein kinase family protein0.93positive
GWHGAAZE015982AT5G27260.1Myb/SANT-like DNA-binding domain protein;(source:Araport11)0.92positive
GWHGAAZE017060AT5G20510.1alfin-like 50.91positive
GWHGAAZE032327AT3G07870.1F-box and associated interaction domains-containing protein0.91positive
GWHGAAZE014479AT1G67810.1sulfur E20.91positive
GWHGAAZE001257AT2G27260.1Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family0.91positive
GWHGAAZE010599AT1G47790.1F-box and associated interaction domains-containing protein0.9positive
GWHGAAZE021804AT4G12560.2F-box and associated interaction domains-containing protein0.9positive
GWHGAAZE003483AT1G52540.1Protein kinase superfamily protein0.9positive
GWHGAAZE022452AT3G48750.1cell division control 20.9positive
GWHGAAZE010560AT1G46840.1F-box family protein0.9positive
GWHGAAZE020693AT3G01770.1bromodomain and extraterminal domain protein 100.9positive
GWHGAAZE021008AT1G56140.1Leucine-rich repeat transmembrane protein kinase0.89positive
GWHGAAZE022849AT1G10370.1Glutathione S-transferase family protein0.89positive
GWHGAAZE022551AT1G69970.2CLAVATA3/ESR-RELATED 260.89positive
GWHGAAZE001484AT2G27130.1Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein0.89positive
GWHGAAZE002360AT2G21100.1Disease resistance-responsive (dirigent-like protein) family protein0.89positive
GWHGAAZE010964AT2G37435.1Cystatin/monellin superfamily protein0.88positive
GWHGAAZE002948AT3G18590.1early nodulin-like protein 50.88positive
GWHGAAZE032294----0.87positive
GWHGAAZE017064AT5G20510.1alfin-like 50.87positive
GWHGAAZE007863AT2G17030.1F-box family protein with a domain of unknown function (DUF295)0.87positive
GWHGAAZE010971AT2G37435.1Cystatin/monellin superfamily protein0.87positive
GWHGAAZE024649AT2G24300.1Calmodulin-binding protein0.86positive


Expression profiling, GSEA and motif analysis