LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE013286

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE013286

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE013286AT3G52880.1monodehydroascorbate reductase 11positive
GWHGAAZE017454AT1G15520.1pleiotropic drug resistance 120.95positive
GWHGAAZE000164AT2G47730.1glutathione S-transferase phi 80.92positive
GWHGAAZE015203AT5G65380.1MATE efflux family protein0.92positive
GWHGAAZE007165AT2G41380.1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein0.92positive
GWHGAAZE010751AT3G59340.1Eukaryotic protein of unknown function (DUF914)0.91positive
GWHGAAZE028105AT5G01380.1Homeodomain-like superfamily protein0.9positive
GWHGAAZE022744AT2G03530.2ureide permease 20.9positive
GWHGAAZE004319AT1G52030.2myrosinase-binding protein 20.89positive
GWHGAAZE024714AT1G54570.1Esterase/lipase/thioesterase family protein0.89positive
GWHGAAZE006819AT2G34660.2multidrug resistance-associated protein 20.89positive
GWHGAAZE026371AT2G45510.1cytochrome P450, family 704, subfamily A, polypeptide 20.89positive
GWHGAAZE002973AT5G47770.1farnesyl diphosphate synthase 10.89positive
GWHGAAZE019943AT4G16740.2terpene synthase 030.89positive
GWHGAAZE018736AT5G64250.2Aldolase-type TIM barrel family protein0.88positive
GWHGAAZE033149AT1G18800.1NAP1-related protein 20.88positive
GWHGAAZE004318AT1G52040.1myrosinase-binding protein 10.88positive
GWHGAAZE007088AT1G51340.2MATE efflux family protein0.88positive
GWHGAAZE000502AT5G48540.1receptor-like protein kinase-related family protein0.88positive
GWHGAAZE002596AT4G39330.1cinnamyl alcohol dehydrogenase 90.88positive
GWHGAAZE031904AT1G60750.1NAD(P)-linked oxidoreductase superfamily protein0.87positive
GWHGAAZE022499AT1G80910.1Protein of unknown function (DUF1712)0.87positive
GWHGAAZE013001AT3G51840.1acyl-CoA oxidase 40.87positive
GWHGAAZE001766AT1G06550.1ATP-dependent caseinolytic (Clp) protease/crotonase family protein0.87positive
GWHGAAZE004320AT1G33790.2jacalin lectin family protein0.87positive
GWHGAAZE001767AT5G18950.1Tetratricopeptide repeat (TPR)-like superfamily protein0.87positive
GWHGAAZE000762AT1G07630.1pol-like 50.87positive
GWHGAAZE001202----0.87positive
GWHGAAZE018738AT1G22370.2UDP-glucosyl transferase 85A50.87positive
GWHGAAZE025283AT5G14860.1UDP-Glycosyltransferase superfamily protein0.87positive
GWHGAAZE015031AT4G03220.1Protein with RNI-like/FBD-like domains0.87positive
GWHGAAZE028933AT3G43740.1Leucine-rich repeat (LRR) family protein0.87positive
GWHGAAZE010621AT3G54420.1homolog of carrot EP3-3 chitinase0.86positive
GWHGAAZE026718AT2G39420.1alpha/beta-Hydrolases superfamily protein0.86positive
GWHGAAZE003102AT4G30230.1hypothetical protein;(source:Araport11)0.86positive
GWHGAAZE013963AT2G21520.1Sec14p-like phosphatidylinositol transfer family protein0.86positive
GWHGAAZE028010AT4G19160.2transglutaminase family protein;(source:Araport11)0.86positive
GWHGAAZE013448----0.86positive
GWHGAAZE019730AT2G30650.1ATP-dependent caseinolytic (Clp) protease/crotonase family protein0.86positive
GWHGAAZE018770AT1G36050.2Endoplasmic reticulum vesicle transporter protein0.86positive
GWHGAAZE016338AT4G24460.2CRT (chloroquine-resistance transporter)-like transporter 20.86positive
GWHGAAZE029936AT4G34120.1Cystathionine beta-synthase (CBS) family protein0.86positive
GWHGAAZE025047AT4G01070.1UDP-Glycosyltransferase superfamily protein0.86positive
GWHGAAZE007815AT2G22540.2K-box region and MADS-box transcription factor family protein 0.86positive


Expression profiling, GSEA and motif analysis