LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE016145

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE016145

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE016145AT2G03890.1phosphoinositide 4-kinase gamma 71positive
GWHGAAZE020235AT5G36110.1cytochrome P450, family 716, subfamily A, polypeptide 11positive
GWHGAAZE022863AT1G70000.2myb-like transcription factor family protein1positive
GWHGAAZE010281AT2G38100.1proton-dependent oligopeptide transport (POT) family protein1positive
GWHGAAZE014888AT4G28815.1basic helix-loop-helix (bHLH) DNA-binding superfamily protein1positive
GWHGAAZE015653AT5G41770.1crooked neck protein, putative / cell cycle protein, putative1positive
GWHGAAZE032047AT3G26660.1LOB domain-containing protein 241positive
GWHGAAZE024966----1positive
GWHGAAZE026257AT2G07505.1zinc ion binding1positive
GWHGAAZE019362AT5G55500.1beta-1,2-xylosyltransferase1positive
GWHGAAZE023667----0.99positive
GWHGAAZE015674AT3G58610.3ketol-acid reductoisomerase0.98positive
GWHGAAZE032717----0.95positive
GWHGAAZE008013AT1G71250.1GDSL-like Lipase/Acylhydrolase superfamily protein0.94positive
GWHGAAZE029695AT5G58230.1Transducin/WD40 repeat-like superfamily protein0.93positive
GWHGAAZE010396AT3G26240.1Cysteine/Histidine-rich C1 domain family protein0.91positive
GWHGAAZE013304AT3G42140.1zinc ion binding;nucleic acid binding0.9positive
GWHGAAZE002576AT3G14660.1cytochrome P450, family 72, subfamily A, polypeptide 130.9positive
GWHGAAZE033447AT4G35520.1MUTL protein homolog 30.89positive
GWHGAAZE017452AT1G52800.12-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein0.89positive
GWHGAAZE032687AT1G17860.1Kunitz family trypsin and protease inhibitor protein0.88positive
GWHGAAZE024145AT4G19950.1polyadenylate-binding protein 1-B-binding protein;(source:Araport11)0.87positive
GWHGAAZE032013AT5G36260.1Eukaryotic aspartyl protease family protein0.87positive


Expression profiling, GSEA and motif analysis