LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE016519

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE016519

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE016519AT3G13690.1Protein kinase protein with adenine nucleotide alpha hydrolases-like domain1positive
GWHGAAZE023105AT3G48860.2coiled-coil protein;(source:Araport11)0.89positive
GWHGAAZE026641AT2G39740.1Nucleotidyltransferase family protein0.88positive
GWHGAAZE031882AT3G04810.2NIMA-related kinase 20.88positive
GWHGAAZE006064AT1G63300.1Myosin heavy chain-related protein0.87positive
GWHGAAZE033216AT5G40140.1RING/U-box superfamily protein with ARM repeat domain0.87positive
GWHGAAZE024447AT2G26610.1Transducin family protein / WD-40 repeat family protein0.86positive
GWHGAAZE004216AT5G06610.1Protein of unknown function (DUF620)0.86positive
GWHGAAZE006490AT1G12000.1Phosphofructokinase family protein0.86positive
GWHGAAZE022237AT3G66658.2aldehyde dehydrogenase 22A10.86positive
GWHGAAZE015019AT2G17200.1ubiquitin family protein0.86positive
GWHGAAZE003923AT1G03520.1Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein0.86positive
GWHGAAZE004519AT1G29790.2S-adenosyl-L-methionine-dependent methyltransferases superfamily protein0.86positive
GWHGAAZE027174AT3G15380.1Plasma-membrane choline transporter family protein0.86positive


Expression profiling, GSEA and motif analysis