LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE019779

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE019779

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE019779AT4G25990.2CCT motif family protein1positive
GWHGAAZE019775----0.97positive
GWHGAAZE013234AT3G53180.1glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases0.92positive
GWHGAAZE026186AT5G10690.1pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein0.91positive
GWHGAAZE018407AT2G21370.1xylulose kinase-10.91positive
GWHGAAZE003712AT4G37740.1growth-regulating factor 20.91positive
GWHGAAZE013423AT1G26230.1TCP-1/cpn60 chaperonin family protein0.9positive
GWHGAAZE013235AT3G53180.1glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases0.9positive
GWHGAAZE033303AT1G73870.1B-box type zinc finger protein with CCT domain0.89positive
GWHGAAZE017529AT1G15290.1Tetratricopeptide repeat (TPR)-like superfamily protein0.87positive
GWHGAAZE009792----0.86positive
GWHGAAZE025583AT2G26900.1Sodium Bile acid symporter family0.86positive
GWHGAAZE003125AT3G45630.1RNA binding (RRM/RBD/RNP motifs) family protein0.86positive
GWHGAAZE031115AT3G14110.2Tetratricopeptide repeat (TPR)-like superfamily protein0.86positive
GWHGAAZE032225AT1G03100.1Pentatricopeptide repeat (PPR) superfamily protein0.86positive


Expression profiling, GSEA and motif analysis