LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE024500

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE024500

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE024500AT1G60430.2actin-related protein C31positive
GWHGAAZE013341AT2G42780.1transcription elongation factor B polypeptide;(source:Araport11)0.91positive
GWHGAAZE033133AT3G28970.1Domain of unknown function (DUF298)0.9positive
GWHGAAZE026899AT4G12560.2F-box and associated interaction domains-containing protein0.88positive
GWHGAAZE013662AT4G24740.1FUS3-complementing gene 20.88positive
GWHGAAZE006843AT4G21160.4Calcium-dependent ARF-type GTPase activating protein family0.88positive
GWHGAAZE013947AT1G75440.1ubiquitin-conjugating enzyme 160.88positive
GWHGAAZE003959AT3G56930.2DHHC-type zinc finger family protein0.87positive
GWHGAAZE018580AT2G15240.1UNC-50 family protein0.87positive
GWHGAAZE009802AT3G09100.2mRNA capping enzyme family protein0.87positive
GWHGAAZE031034AT1G72710.1casein kinase 1-like protein 20.87positive
GWHGAAZE012768AT5G53310.1myosin heavy chain-related0.87positive
GWHGAAZE003860AT2G35840.3Sucrose-6F-phosphate phosphohydrolase family protein0.86positive
GWHGAAZE006185AT1G12360.1Sec1/munc18-like (SM) proteins superfamily0.86positive
GWHGAAZE025340AT5G40440.1mitogen-activated protein kinase kinase 30.86positive
GWHGAAZE003274AT2G39960.1Microsomal signal peptidase 25 kDa subunit (SPC25)0.86positive


Expression profiling, GSEA and motif analysis