LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE026909

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE026909

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE026909AT2G20900.3diacylglycerol kinase 51positive
GWHGAAZE010109ATMG00513.1NADH dehydrogenase 5A-0.61negative
GWHGAAZE010074AT5G15890.1TRICHOME BIREFRINGENCE-LIKE 21-0.61negative
GWHGAAZE010020ATMG00990.1NADH dehydrogenase 3-0.59negative
GWHGAAZE010068ATMG00660.1hypothetical protein;(source:Araport11)-0.59negative
GWHGAAZE008348AT2G28590.1Protein kinase superfamily protein-0.59negative
GWHGAAZE025183AT3G12160.1RAB GTPase homolog A4D-0.58negative
GWHGAAZE010072AT2G44065.2Ribosomal protein L2 family-0.58negative
GWHGAAZE007435AT5G49560.1Putative methyltransferase family protein-0.58negative
GWHGAAZE009079AT5G60800.2Heavy metal transport/detoxification superfamily protein -0.57negative
GWHGAAZE012435AT1G14530.2Protein of unknown function (DUF1084)-0.57negative
GWHGAAZE002335AT2G32380.1Transmembrane protein 97, predicted-0.57negative
GWHGAAZE012943AT3G52850.1vacuolar sorting receptor homolog 1-0.57negative
GWHGAAZE020623AT1G05510.1Protein of unknown function (DUF1264)-0.57negative
GWHGAAZE006942AT1G31280.1Argonaute family protein-0.56negative
GWHGAAZE010070AT4G30710.1Family of unknown function (DUF566) -0.56negative
GWHGAAZE019972AT5G15280.1Pentatricopeptide repeat (PPR) superfamily protein-0.56negative
GWHGAAZE003191AT5G02500.1heat shock cognate protein 70-1-0.56negative
GWHGAAZE004859AT1G22240.1pumilio 8-0.56negative
GWHGAAZE003634AT5G24130.1polypyrimidine tract-binding-like protein;(source:Araport11)-0.56negative
GWHGAAZE022497AT4G17720.1RNA-binding (RRM/RBD/RNP motifs) family protein-0.56negative
GWHGAAZE022356AT3G19940.1Major facilitator superfamily protein-0.56negative
GWHGAAZE012458AT1G14670.1Endomembrane protein 70 protein family-0.56negative
GWHGAAZE030543AT5G62850.1Nodulin MtN3 family protein-0.56negative
GWHGAAZE025359AT3G27440.1uridine kinase-like 5-0.56negative
GWHGAAZE001110AT5G21050.1hyccin;(source:Araport11)-0.56negative
GWHGAAZE003174AT4G01470.1tonoplast intrinsic protein 1;3-0.56negative


Expression profiling, GSEA and motif analysis