Coexpression Network

Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE028179

Gene:
Yellow--query gene Green--co-expressed genes Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage
Complete white stage/Juvenile bud stage
Silver flowering stage/Juvenile bud stage
Gold flowering stage/Juvenile bud stage
Complete white stage/Third green stage
Silver flowering stage/Third green stage
Gold flowering stage/Third green stage
Silver flowering stage/Complete white stage
Gold flowering stage/Complete white stage
Gold flowering stage/Silver flowering stage

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)

Co-expressed genes of GWHGAAZE028179

Co-expression relationship

ID	Ortholog in Arabidopsis	Annotation	PCC	Relationship
GWHGAAZE028179	AT3G14840.2	Leucine-rich repeat transmembrane protein kinase	1	positive
GWHGAAZE015480	AT1G63750.2	Disease resistance protein (TIR-NBS-LRR class) family	0.92	positive
GWHGAAZE013107	AT3G53750.1	actin 3	0.89	positive
GWHGAAZE023719	AT3G13870.2	Root hair defective 3 GTP-binding protein (RHD3)	0.88	positive
GWHGAAZE032674	AT4G26400.2	RING/U-box superfamily protein	0.87	positive
GWHGAAZE018201	AT5G17330.1	glutamate decarboxylase	0.86	positive
GWHGAAZE032917	AT4G33790.1	Jojoba acyl CoA reductase-related male sterility protein	0.86	positive
GWHGAAZE020648	AT5G43730.1	Disease resistance protein (CC-NBS-LRR class) family	0.86	positive

Expression profiling, GSEA and motif analysis