LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE031078

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE031078

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE031078AT1G66920.2Protein kinase superfamily protein1positive
GWHGAAZE001815AT1G12740.1cytochrome P450, family 87, subfamily A, polypeptide 20.95positive
GWHGAAZE006706AT1G78960.1lupeol synthase 20.93positive
GWHGAAZE022197AT1G24020.2MLP-like protein 4230.92positive
GWHGAAZE020116AT5G36110.1cytochrome P450, family 716, subfamily A, polypeptide 10.92positive
GWHGAAZE001825AT1G12740.1cytochrome P450, family 87, subfamily A, polypeptide 20.92positive
GWHGAAZE004750AT3G23250.1myb domain protein 150.91positive
GWHGAAZE031081AT5G38260.1Protein kinase superfamily protein0.91positive
GWHGAAZE020115AT5G36110.1cytochrome P450, family 716, subfamily A, polypeptide 10.91positive
GWHGAAZE006877AT5G44410.1FAD-binding Berberine family protein0.91positive
GWHGAAZE004635AT2G17480.1Seven transmembrane MLO family protein0.9positive
GWHGAAZE010621AT3G54420.1homolog of carrot EP3-3 chitinase0.9positive
GWHGAAZE013310AT3G52970.1cytochrome P450, family 76, subfamily G, polypeptide 10.9positive
GWHGAAZE001847AT3G14690.1cytochrome P450, family 72, subfamily A, polypeptide 150.9positive
GWHGAAZE005461----0.9positive
GWHGAAZE014172AT1G59590.1ZCF370.9positive
GWHGAAZE022196AT1G24020.2MLP-like protein 4230.89positive
GWHGAAZE010623AT3G54420.1homolog of carrot EP3-3 chitinase0.89positive
GWHGAAZE028933AT3G43740.1Leucine-rich repeat (LRR) family protein0.89positive
GWHGAAZE024475AT1G69550.1disease resistance protein (TIR-NBS-LRR class)0.88positive
GWHGAAZE002529AT1G78380.1glutathione S-transferase TAU 190.88positive
GWHGAAZE004236AT4G13180.1NAD(P)-binding Rossmann-fold superfamily protein0.88positive
GWHGAAZE027053AT1G17180.1glutathione S-transferase TAU 250.87positive
GWHGAAZE000403AT2G29420.1glutathione S-transferase tau 70.87positive
GWHGAAZE010691AT1G60690.1NAD(P)-linked oxidoreductase superfamily protein0.87positive
GWHGAAZE012263AT1G24020.2MLP-like protein 4230.86positive
GWHGAAZE004866----0.86positive
GWHGAAZE019519AT1G16150.1wall associated kinase-like 40.86positive
GWHGAAZE011183AT4G08850.1Leucine-rich repeat receptor-like protein kinase family protein0.86positive


Expression profiling, GSEA and motif analysis